S. scrofa Gene: - ENSSSCG00000020829 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000020829
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.29e3
  • 5.29e3
  • 1.15e4
  • 1.16e4
77.25826
  • 77.25826
  • 50.73985
  • 50.05054
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
8.48e3
  • 8.48e3
63.54095
  • 63.54095
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
8.55e3
  • 8.55e3
63.20578
  • 63.20578
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
9.65e3
  • 9.65e3
  • 1.18e4
58.50396
  • 58.50396
  • 49.28265
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.00e4
  • 1.00e4
  • 1.45e4
56.87801
  • 56.87801
  • 37.48710
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
  • 1.35e4
52.92154
  • 52.92154
  • 41.83586
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
  • 1.25e4
52.08190
  • 52.08190
  • 46.11003
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
48.17619
  • 48.17619
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.25e4
  • 1.25e4
46.10560
  • 46.10560
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
45.17920
  • 45.17920
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
44.96735
  • 44.96735
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
44.65614
  • 44.65614
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
44.53282
  • 44.53282
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.31e4
  • 1.31e4
43.84386
  • 43.84386
AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.33e4
  • 1.33e4
42.81560
  • 42.81560
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.53e4
42.78893
  • 42.78893
  • 34.29112
AEIR
  • AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
41.96288
  • 41.96288
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
  • 1.44e4
  • 1.45e4
40.74286
  • 40.74286
  • 38.15593
  • 37.44701
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
40.65821
  • 40.65821
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.39e4
  • 1.39e4
40.28488
  • 40.28488
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.42e4
  • 1.42e4
38.71481
  • 38.71481
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
1.47e4
  • 1.47e4
36.90735
  • 36.90735
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.50e4
  • 1.50e4
35.28458
  • 35.28458
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.53e4
  • 1.53e4
34.19679
  • 34.19679
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLFP102918
EnsemblENSSSCG00000020829
Uniprot/SPTREMBLI3LKZ8, I3LKZ8_PIG

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