S. scrofa Gene: - ENSSSCG00000020978 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000020978
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
799
  • 799
96.04823
  • 96.04823
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
5.70e3
  • 5.70e3
71.79786
  • 71.79786
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
63.35454
  • 63.35454
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.74e3
  • 7.74e3
  • 1.15e4
61.68787
  • 61.68787
  • 43.14507
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.98e3
  • 7.98e3
60.47763
  • 60.47763
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.08e4
  • 1.08e4
46.63862
  • 46.63862
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSSSCG00000020978
Uniprot/SPTREMBLI3LIQ9, I3LIQ9_PIG

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