S. scrofa Gene: - ENSSSCG00000021236 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021236
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
1.55e3
  • 1.55e3
  • 6.25e3
93.35633
  • 93.35633
  • 73.14178
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
2.85e3
  • 2.85e3
87.76239
  • 87.76239
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.21e3
  • 3.21e3
  • 9.59e3
86.20174
  • 86.20174
  • 58.74914
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
3.29e3
  • 3.29e3
85.83280
  • 85.83280
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
3.30e3
  • 3.30e3
  • 5.98e3
  • 7.18e3
85.79663
  • 85.79663
  • 74.26703
  • 69.11992
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
5.03e3
  • 5.03e3
  • 9.44e3
78.35908
  • 78.35908
  • 59.39866
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
5.06e3
  • 5.06e3
  • 8.66e3
78.23482
  • 78.23482
  • 62.75774
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
5.13e3
  • 5.13e3
  • 9.49e3
77.92498
  • 77.92498
  • 59.16638
AEIR
  • AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
5.89e3
  • 5.89e3
74.64750
  • 74.64750
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.95e3
  • 5.95e3
74.41221
  • 74.41221
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.05e3
  • 6.05e3
73.99260
  • 73.99260
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
6.15e3
  • 6.15e3
  • 7.63e3
73.56220
  • 73.56220
  • 67.17567
AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
6.60e3
  • 6.60e3
71.61988
  • 71.61988
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
7.61e3
  • 7.61e3
67.26325
  • 67.26325
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
7.77e3
  • 7.77e3
66.59670
  • 66.59670
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
8.21e3
  • 8.21e3
64.66900
  • 64.66900
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
8.86e3
  • 8.86e3
  • 9.32e3
  • 1.32e4
61.90163
  • 61.90163
  • 59.92989
  • 43.19989
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
9.39e3
  • 9.39e3
59.60074
  • 59.60074
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
9.70e3
  • 9.70e3
58.27929
  • 58.27929
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
9.82e3
  • 9.82e3
57.77207
  • 57.77207
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
1.00e4
  • 1.00e4
56.78824
  • 56.78824
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.04e4
  • 1.04e4
55.45092
  • 55.45092
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.06e4
  • 1.06e4
54.49862
  • 54.49862
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.09e4
  • 1.09e4
53.00834
  • 53.00834
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.11e4
  • 1.11e4
52.22656
  • 52.22656
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.12e4
  • 1.12e4
51.62982
  • 51.62982
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.17e4
  • 1.17e4
49.54263
  • 49.54263
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.16758
  • 48.16758
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.23e4
  • 1.23e4
46.95677
  • 46.95677
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.26e4
  • 1.26e4
45.87371
  • 45.87371
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
45.45212
  • 45.45212
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.27e4
  • 1.27e4
45.17924
  • 45.17924
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
44.87337
  • 44.87337
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
44.80364
  • 44.80364
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.11145
  • 44.11145
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLFP089531
EnsemblENSSSCG00000021236
Uniprot/SPTREMBLF1RKY8, F1RKY8_PIG

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