S. scrofa Gene: - ENSSSCG00000021304 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021304
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000104life cycle
6.94e3
  • 6.94e3
65.66222
  • 65.66222
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.63e3
  • 7.63e3
  • 9.22e3
62.20566
  • 62.20566
  • 54.33848
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
7.72e3
  • 7.72e3
61.78909
  • 61.78909
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.66e3
  • 9.66e3
52.14797
  • 52.14797
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.05e4
  • 1.05e4
48.00307
  • 48.00307
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.27e4
  • 1.27e4
36.93946
  • 36.93946
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU467072
EnsemblENSSSCG00000021304
Uniprot/SPTREMBLI3LCA3, I3LCA3_PIG

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