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S. scrofa Gene: - ENSSSCG00000021523 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021523
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)17 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
1.73e4
  • 1.73e4
26.68
  • 26.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria3 species4 genesCompare expression
Boreoeutheria8 species16 genesCompare expression
Amniota9 species17 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000021523.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Amniota4 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000021523.

Cross-references

EnsemblENSSSCG00000021523
EMBLCT971480
Uniprot/SPTREMBLF1S7M7, F1S7M7_PIG

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