S. scrofa Gene: - ENSSSCG00000021670 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021670
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0034919juvenile stage
1.52e3
  • 1.52e3
93.48331
  • 93.48331
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
4.71e3
  • 4.71e3
  • 1.04e4
79.74449
  • 79.74449
  • 55.13352
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
4.83e3
  • 4.83e3
79.20905
  • 79.20905
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
5.38e3
  • 5.38e3
76.86089
  • 76.86089
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
5.55e3
  • 5.55e3
76.12315
  • 76.12315
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
5.91e3
  • 5.91e3
74.60113
  • 74.60113
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
5.99e3
  • 5.99e3
74.24110
  • 74.24110
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
6.50e3
  • 6.50e3
  • 1.50e4
72.02770
  • 72.02770
  • 35.29998
AEIR
  • AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
6.92e3
  • 6.92e3
70.24837
  • 70.24837
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
7.00e3
  • 7.00e3
69.88304
  • 69.88304
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
7.02e3
  • 7.02e3
  • 1.38e4
  • 1.42e4
69.82897
  • 69.82897
  • 40.73331
  • 38.92533
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
7.04e3
  • 7.04e3
69.71757
  • 69.71757
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
7.10e3
  • 7.10e3
69.47871
  • 69.47871
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
7.37e3
  • 7.37e3
68.30153
  • 68.30153
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
7.50e3
  • 7.50e3
67.72626
  • 67.72626
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
7.61e3
  • 7.61e3
  • 9.93e3
  • 1.33e4
67.27460
  • 67.27460
  • 57.30050
  • 42.69615
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
7.62e3
  • 7.62e3
67.20582
  • 67.20582
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
7.71e3
  • 7.71e3
66.83642
  • 66.83642
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
7.76e3
  • 7.76e3
66.61352
  • 66.61352
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
7.81e3
  • 7.81e3
66.41875
  • 66.41875
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
7.82e3
  • 7.82e3
  • 1.49e4
66.37990
  • 66.37990
  • 36.10633
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
7.84e3
  • 7.84e3
  • 8.12e3
  • 1.09e4
66.30248
  • 66.30248
  • 65.07119
  • 52.97380
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
7.87e3
  • 7.87e3
66.13313
  • 66.13313
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
8.16e3
  • 8.16e3
  • 1.40e4
64.90021
  • 64.90021
  • 39.68561
AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
8.16e3
  • 8.16e3
64.88786
  • 64.88786
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
8.33e3
  • 8.33e3
64.15993
  • 64.15993
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
8.35e3
  • 8.35e3
64.08921
  • 64.08921
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
8.54e3
  • 8.54e3
63.25572
  • 63.25572
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
9.03e3
  • 9.03e3
61.14698
  • 61.14698
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
9.58e3
  • 9.58e3
58.81766
  • 58.81766
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.64e3
  • 9.64e3
58.55205
  • 58.55205
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
9.81e3
  • 9.81e3
57.80717
  • 57.80717
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.02e4
  • 1.02e4
56.08422
  • 56.08422
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
55.88438
  • 55.88438
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
54.68630
  • 54.68630
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.06e4
  • 1.06e4
54.46185
  • 54.46185
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.22e4
  • 1.22e4
47.45690
  • 47.45690
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
39.50542
  • 39.50542
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU468387
EnsemblENSSSCG00000021670
Uniprot/SPTREMBLI3LKE7, I3LKE7_PIG

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