S. scrofa Gene: PTPN2 - ENSSSCG00000021738 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021738
NamePTPN2
Descriptionprotein tyrosine phosphatase, non-receptor type 2 [Source:HGNC Symbol;Acc:HGNC:9650]
OrganismSus scrofa (pig)
Synonym(s)ptpt, tc-ptp, tcellptp, tcptp

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
4.21e3
  • 4.21e3
79.14180
  • 79.14180
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
4.72e3
  • 4.72e3
76.64595
  • 76.64595
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
5.97e3
  • 5.97e3
  • 7.82e3
70.44594
  • 70.44594
  • 61.29834
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
6.48e3
  • 6.48e3
67.92002
  • 67.92002
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.07e4
  • 1.07e4
46.81977
  • 46.81977
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLFP312930, FP565312
EnsemblENSSSCG00000021738 (PTPN2)
HGNCHGNC:9650 (PTPN2)
Uniprot/SPTREMBLI3L9Z5, I3L9Z5_PIG

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