S. scrofa Gene: - ENSSSCG00000021752 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021752
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
2.30e3
  • 2.30e3
  • 5.38e3
90.13248
  • 90.13248
  • 76.87973
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
2.79e3
  • 2.79e3
  • 1.11e4
88.02047
  • 88.02047
  • 52.42868
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
7.00e3
  • 7.00e3
  • 1.12e4
69.88558
  • 69.88558
  • 51.66875
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
7.41e3
  • 7.41e3
68.13885
  • 68.13885
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
8.42e3
  • 8.42e3
63.78243
  • 63.78243
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
8.79e3
  • 8.79e3
62.19989
  • 62.19989
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
8.99e3
  • 8.99e3
61.31586
  • 61.31586
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
9.41e3
  • 9.41e3
59.52912
  • 59.52912
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
9.54e3
  • 9.54e3
58.96477
  • 58.96477
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
9.61e3
  • 9.61e3
58.67111
  • 58.67111
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
  • 1.20e4
56.53820
  • 56.53820
  • 48.23959
AEIR
  • AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
55.48993
  • 55.48993
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
  • 1.10e4
  • 1.29e4
54.24024
  • 54.24024
  • 52.66690
  • 44.69202
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.08e4
  • 1.08e4
  • 1.64e4
53.56590
  • 53.56590
  • 29.67567
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
1.16e4
  • 1.16e4
50.24518
  • 50.24518
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.18e4
  • 1.18e4
49.40808
  • 49.40808
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
48.42455
  • 48.42455
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
48.01415
  • 48.01415
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.21e4
  • 1.21e4
47.93832
  • 47.93832
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.23e4
  • 1.23e4
  • 1.46e4
47.15339
  • 47.15339
  • 37.16449
AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.23e4
  • 1.23e4
46.96322
  • 46.96322
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
  • 1.25e4
  • 1.41e4
46.93182
  • 46.93182
  • 46.44490
  • 39.20668
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.26e4
  • 1.26e4
45.92309
  • 45.92309
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
45.03699
  • 45.03699
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
44.99759
  • 44.99759
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.33e4
  • 1.33e4
42.61356
  • 42.61356
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
42.07768
  • 42.07768
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.04491
  • 42.04491
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
41.47565
  • 41.47565
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.36e4
  • 1.36e4
41.40653
  • 41.40653
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
41.36154
  • 41.36154
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.68e4
  • 1.68e4
27.68466
  • 27.68466
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.69e4
  • 1.69e4
27.31938
  • 27.31938
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSSSCG00000021752
Uniprot/SPTREMBLI3LID4, I3LID4_PIG

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