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S. scrofa Gene: - ENSSSCG00000021767 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021767
Name-
DescriptionL-threonine 3-dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8MIR0]
OrganismSus scrofa (pig)
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000023oocyte
  • UBERON:0034919juvenile stage
967
  • 967
95.91
  • 95.91
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.10e3
  • 1.10e3
95.35
  • 95.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.45e3
  • 1.45e3
  • 1.53e3
  • 3.57e3
93.87
  • 93.87
  • 93.52
  • 84.89
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.19e3
  • 4.19e3
82.23
  • 82.23
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.56e3
  • 5.56e3
76.43
  • 76.43
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
7.68e3
  • 7.68e3
  • 1.05e4
67.46
  • 67.46
  • 55.64
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.15e4
  • 1.15e4
51.11
  • 51.11
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.26e4
  • 1.26e4
46.52
  • 46.52
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
39.65
  • 39.65
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.45e4
  • 1.45e4
38.73
  • 38.73
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.49e4
  • 1.49e4
36.78
  • 36.78
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
  • 1.60e4
35.00
  • 35.00
  • 32.16
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.63e4
  • 1.63e4
30.96
  • 30.96
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.65e4
  • 1.65e4
  • 1.82e4
30.19
  • 30.19
  • 22.80
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
29.39
  • 29.39
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.67e4
  • 1.67e4
29.32
  • 29.32
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.67e4
  • 1.67e4
29.09
  • 29.09
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.69e4
  • 1.69e4
  • 1.79e4
  • 1.80e4
  • 1.84e4
28.22
  • 28.22
  • 24.03
  • 23.67
  • 21.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
  • 2.09e4
26.97
  • 26.97
  • 11.55
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.74e4
  • 1.74e4
  • 1.83e4
  • 1.85e4
  • 1.94e4
26.42
  • 26.42
  • 22.33
  • 21.42
  • 17.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
25.18
  • 25.18
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.77e4
  • 1.77e4
24.87
  • 24.87
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.95e4
  • 1.95e4
17.39
  • 17.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria9 species9 genesCompare expression
Mammalia10 species10 genesCompare expression
Amniota12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000021767.

Cross-references

EnsemblENSSSCG00000021767
EMBLAY095535
Uniprot/SWISSPROTQ8MIR0, TDH_PIG

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