S. scrofa Gene: - ENSSSCG00000021786 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000021786
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
997
  • 997
95.71408
  • 95.71408
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
1.77e3
  • 1.77e3
92.38283
  • 92.38283
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.85e3
  • 1.85e3
92.04383
  • 92.04383
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
2.18e3
  • 2.18e3
90.62229
  • 90.62229
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
2.59e3
  • 2.59e3
  • 6.89e3
  • 6.94e3
88.85237
  • 88.85237
  • 70.36347
  • 70.15782
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
3.01e3
  • 3.01e3
87.07054
  • 87.07054
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
3.08e3
  • 3.08e3
86.75800
  • 86.75800
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
3.47e3
  • 3.47e3
85.07390
  • 85.07390
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
4.08e3
  • 4.08e3
82.45075
  • 82.45075
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
4.26e3
  • 4.26e3
81.66324
  • 81.66324
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
6.65e3
  • 6.65e3
71.39750
  • 71.39750
AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
7.72e3
  • 7.72e3
66.80807
  • 66.80807
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
7.77e3
  • 7.77e3
  • 9.31e3
66.56487
  • 66.56487
  • 59.94189
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
1.03e4
  • 1.03e4
55.69942
  • 55.69942
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.24e4
  • 1.24e4
46.45707
  • 46.45707
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.35e4
  • 1.35e4
42.08827
  • 42.08827
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.42e4
  • 1.42e4
39.01647
  • 39.01647
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
30.47892
  • 30.47892
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.62e4
  • 1.62e4
30.34330
  • 30.34330
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
1.67e4
  • 1.67e4
28.33474
  • 28.33474
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.76e4
  • 1.76e4
24.46662
  • 24.46662
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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