S. scrofa Gene: - ENSSSCG00000022059 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000022059
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
88.3
  • 88.3
99.62457
  • 99.62457
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
93.3
  • 93.3
99.60319
  • 99.60319
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
95.0
  • 95.0
  • 1.17e4
99.59566
  • 99.59566
  • 49.46662
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0034919juvenile stage
162
  • 162
  • 7.67e3
99.30622
  • 99.30622
  • 67.03372
AEIR
  • AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
214
  • 214
99.08168
  • 99.08168
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
391
  • 391
98.32196
  • 98.32196
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
399
  • 399
  • 475
  • 1.01e4
98.28751
  • 98.28751
  • 97.96219
  • 56.53080
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
435
  • 435
98.13464
  • 98.13464
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
465
  • 465
  • 7.68e3
98.00413
  • 98.00413
  • 66.97217
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
549
  • 549
  • 2.62e3
  • 1.12e4
97.64281
  • 97.64281
  • 88.74346
  • 51.61734
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
2.68e3
  • 2.68e3
  • 3.96e3
  • 1.04e4
88.48021
  • 88.48021
  • 82.96155
  • 55.07140
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
4.99e3
  • 4.99e3
78.55730
  • 78.55730
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
5.31e3
  • 5.31e3
77.18260
  • 77.18260
AEIR
  • AEIR
UBERON:0002084heart left ventricle
  • UBERON:0034919juvenile stage
5.46e3
  • 5.46e3
76.53802
  • 76.53802
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
5.90e3
  • 5.90e3
74.61287
  • 74.61287
AEIR
  • AEIR
UBERON:0002509mesenteric lymph node
  • UBERON:0034919juvenile stage
6.10e3
  • 6.10e3
73.78596
  • 73.78596
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
6.22e3
  • 6.22e3
73.24170
  • 73.24170
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
6.63e3
  • 6.63e3
71.49174
  • 71.49174
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
7.43e3
  • 7.43e3
68.04207
  • 68.04207
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
7.77e3
  • 7.77e3
66.57756
  • 66.57756
AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
8.02e3
  • 8.02e3
65.51785
  • 65.51785
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
8.11e3
  • 8.11e3
65.10797
  • 65.10797
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
8.43e3
  • 8.43e3
63.75602
  • 63.75602
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
8.53e3
  • 8.53e3
63.32252
  • 63.32252
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
8.62e3
  • 8.62e3
62.93217
  • 62.93217
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
8.69e3
  • 8.69e3
62.63924
  • 62.63924
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
9.00e3
  • 9.00e3
  • 1.40e4
61.27839
  • 61.27839
  • 39.71632
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.02e4
  • 1.02e4
55.97195
  • 55.97195
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
1.04e4
  • 1.04e4
55.27060
  • 55.27060
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
44.28531
  • 44.28531
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
41.14208
  • 41.14208
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
40.50120
  • 40.50120
AEIR
  • AEIR
UBERON:0000945stomach
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
40.47854
  • 40.47854
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
1.50e4
  • 1.50e4
35.51781
  • 35.51781
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.66e4
  • 1.66e4
28.47393
  • 28.47393
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLFP102759
EnsemblENSSSCG00000022059
Uniprot/SPTREMBLI3LK51, I3LK51_PIG

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