S. scrofa Gene: - ENSSSCG00000022250 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000022250
Name-
Description-
OrganismSus scrofa (pig)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0034919juvenile stage
5.92e3
  • 5.92e3
74.54835
  • 74.54835
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.46e3
  • 9.46e3
59.32123
  • 59.32123
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
52.40490
  • 52.40490
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
45.57257
  • 45.57257
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.31e4
  • 1.31e4
  • 1.46e4
43.74570
  • 43.74570
  • 37.02065
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.34e4
  • 1.34e4
42.29426
  • 42.29426
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.40e4
  • 1.40e4
  • 1.61e4
39.82708
  • 39.82708
  • 30.75976
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.42e4
  • 1.42e4
  • 1.43e4
38.95909
  • 38.95909
  • 38.40997
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.44e4
  • 1.44e4
37.97509
  • 37.97509
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.45e4
  • 1.45e4
37.81297
  • 37.81297
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.47e4
  • 1.47e4
36.75155
  • 36.75155
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.48e4
  • 1.48e4
  • 1.67e4
36.24398
  • 36.24398
  • 28.37513
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
1.50e4
  • 1.50e4
35.27525
  • 35.27525
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
30.27783
  • 30.27783
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.70e4
  • 1.70e4
26.91746
  • 26.91746
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLFP102076
EnsemblENSSSCG00000022250
Uniprot/SPTREMBLF1S0S5, F1S0S5_PIG

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