We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: GDF5 - ENSSSCG00000023261 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000023261
NameGDF5
Descriptiongrowth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]
OrganismSus scrofa (pig)
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
56.60
  • 56.60
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
1.24e4
  • 1.24e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.32e4
  • 1.32e4
44.02
  • 44.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.43e4
  • 1.43e4
  • 1.44e4
39.57
  • 39.57
  • 38.80
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.44e4
  • 1.44e4
38.84
  • 38.84
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.52e4
  • 1.52e4
  • 1.68e4
35.64
  • 35.64
  • 28.86
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.58e4
  • 1.58e4
33.10
  • 33.10
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
  • 1.93e4
33.10
  • 33.10
  • 18.36
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.61e4
  • 1.61e4
31.69
  • 31.69
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 1.83e4
31.23
  • 31.23
  • 22.22
AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.67e4
  • 1.67e4
  • 1.84e4
  • 1.87e4
  • 1.92e4
29.42
  • 29.42
  • 21.84
  • 20.64
  • 18.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.75e4
  • 1.75e4
25.92
  • 25.92
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.78e4
  • 1.78e4
  • 1.78e4
  • 1.86e4
  • 1.86e4
24.56
  • 24.56
  • 24.54
  • 21.36
  • 20.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.79e4
  • 1.79e4
24.25
  • 24.25
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.81e4
  • 1.81e4
23.18
  • 23.18
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.91e4
  • 1.91e4
18.85
  • 18.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.92e4
  • 1.92e4
18.53
  • 18.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000023261.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000023261.

Cross-references

EnsemblENSSSCG00000023261 (GDF5)
EMBLCU606930, JF913469
Uniprot/SPTREMBLF1S4W8, F1S4W8_PIG

Do not show this banner again