S. scrofa Gene: FANCA - ENSSSCG00000024687 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000024687
NameFANCA
DescriptionFanconi anemia complementation group A [Source:HGNC Symbol;Acc:HGNC:3582]
OrganismSus scrofa (pig)
Synonym(s)fa-h, faa, faca, fah, fanch

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000178blood
  • UBERON:0018685nursing stage
5.17e3
  • 5.17e3
77.75
  • 77.75
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.91e3
  • 5.91e3
74.56
  • 74.56
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.15e3
  • 6.15e3
73.57
  • 73.57
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
7.67e3
  • 7.67e3
  • 1.21e4
67.01
  • 67.01
  • 47.80
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
8.15e3
  • 8.15e3
  • 1.21e4
64.96
  • 64.96
  • 48.07
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
9.45e3
  • 9.45e3
59.34
  • 59.34
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
9.60e3
  • 9.60e3
  • 1.12e4
58.69
  • 58.69
  • 51.63
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.05e4
  • 1.05e4
  • 1.43e4
54.97
  • 54.97
  • 38.45
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
  • 1.16e4
  • 1.22e4
54.79
  • 54.79
  • 50.27
  • 47.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
54.77
  • 54.77
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
54.49
  • 54.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
1.17e4
  • 1.17e4
49.58
  • 49.58
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.20e4
49.09
  • 49.09
  • 48.38
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
1.19e4
  • 1.19e4
48.64
  • 48.64
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
  • 1.20e4
48.58
  • 48.58
  • 48.35
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
1.20e4
  • 1.20e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.28e4
  • 1.28e4
44.89
  • 44.89
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
44.76
  • 44.76
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.29e4
  • 1.29e4
44.51
  • 44.51
AEIR
  • AEIR
UBERON:0002116ileum
  • UBERON:0034919juvenile stage
1.35e4
  • 1.35e4
42.10
  • 42.10
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.42e4
  • 1.42e4
38.72
  • 38.72
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.50e4
  • 1.50e4
35.69
  • 35.69
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.50e4
  • 1.50e4
35.28
  • 35.28
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.51e4
  • 1.51e4
35.22
  • 35.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLFP325274
EnsemblENSSSCG00000024687 (FANCA)
HGNCHGNC:3582 (FANCA)
Uniprot/SPTREMBLI3LKC7, I3LKC7_PIG

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