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S. scrofa Gene: - ENSSSCG00000025789 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000025789
Name-
Description-
OrganismSus scrofa (pig)
Orthologs(s)28 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
555
  • 555
  • 2.13e4
97.65
  • 97.65
  • 9.86
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
1.53e4
  • 1.53e4
35.36
  • 35.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.53e4
  • 1.53e4
  • 1.75e4
34.96
  • 34.96
  • 25.87
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000068embryo stage
1.94e4
  • 1.94e4
17.61
  • 17.61
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
1.96e4
  • 1.96e4
  • 2.06e4
  • 2.19e4
16.93
  • 16.93
  • 12.51
  • 7.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.96e4
  • 1.96e4
  • 1.99e4
16.71
  • 16.71
  • 15.65
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.09e4
  • 2.09e4
11.55
  • 11.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species3 genesCompare expression
Laurasiatheria4 species9 genesCompare expression
Boreoeutheria11 species27 genesCompare expression
Theria12 species28 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000025789.

Cross-references

EnsemblENSSSCG00000025789
EMBLCU928374
Uniprot/SPTREMBLF1RZX6, F1RZX6_PIG

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