We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

S. scrofa Gene: NME5 - ENSSSCG00000027997 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000027997
NameNME5
DescriptionNME/NM23 family member 5 [Source:HGNC Symbol;Acc:HGNC:7853]
OrganismSus scrofa (pig)
Synonym(s)nm23-h5, rsph23
Orthologs(s)17 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
2.35e3
  • 2.35e3
  • 4.08e3
90.04
  • 90.04
  • 82.70
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
3.21e3
  • 3.21e3
  • 1.24e4
  • 1.28e4
86.39
  • 86.39
  • 47.24
  • 45.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
3.42e3
  • 3.42e3
85.51
  • 85.51
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
4.78e3
  • 4.78e3
  • 1.12e4
79.73
  • 79.73
  • 52.70
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
5.48e3
  • 5.48e3
  • 9.36e3
76.79
  • 76.79
  • 60.33
AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
5.92e3
  • 5.92e3
74.92
  • 74.92
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
6.27e3
  • 6.27e3
73.42
  • 73.42
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
7.06e3
  • 7.06e3
70.08
  • 70.08
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
7.22e3
  • 7.22e3
  • 1.05e4
  • 1.21e4
  • 1.38e4
69.41
  • 69.41
  • 55.51
  • 48.88
  • 41.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
7.27e3
  • 7.27e3
69.20
  • 69.20
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
7.31e3
  • 7.31e3
69.02
  • 69.02
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
7.36e3
  • 7.36e3
  • 1.39e4
68.80
  • 68.80
  • 40.88
AEIR
  • AEIR
  • AEIR
UBERON:0010533metanephros cortex
  • UBERON:0034919juvenile stage
7.83e3
  • 7.83e3
66.83
  • 66.83
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
8.00e3
  • 8.00e3
66.09
  • 66.09
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
8.35e3
  • 8.35e3
64.62
  • 64.62
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
8.43e3
  • 8.43e3
64.27
  • 64.27
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0034919juvenile stage
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
8.57e3
  • 8.57e3
  • 1.32e4
  • 1.42e4
63.67
  • 63.67
  • 44.04
  • 40.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
8.77e3
  • 8.77e3
62.81
  • 62.81
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.10e4
  • 1.10e4
  • 1.41e4
  • 1.57e4
53.57
  • 53.57
  • 40.35
  • 33.47
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.17e4
  • 1.17e4
50.29
  • 50.29
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.20
  • 48.20
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.52e4
47.51
  • 47.51
  • 35.61
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.25e4
  • 1.25e4
46.81
  • 46.81
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.28e4
  • 1.28e4
45.68
  • 45.68
AEIR
  • AEIR
UBERON:0003688omentum
  • UBERON:0034919juvenile stage
1.30e4
  • 1.30e4
45.09
  • 45.09
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.31e4
  • 1.31e4
  • 1.54e4
  • 1.76e4
44.59
  • 44.59
  • 34.89
  • 25.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.33e4
  • 1.33e4
43.73
  • 43.73
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.35e4
  • 1.35e4
42.98
  • 42.98
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.37e4
  • 1.37e4
41.85
  • 41.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.41e4
  • 1.41e4
  • 1.56e4
  • 1.86e4
40.37
  • 40.37
  • 34.07
  • 21.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001155colon
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
39.56
  • 39.56
AEIR
  • AEIR
UBERON:0001153caecum
  • UBERON:0034919juvenile stage
1.47e4
  • 1.47e4
37.75
  • 37.75
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
  • 1.64e4
36.21
  • 36.21
  • 30.60
AEIR
  • AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.60e4
  • 1.60e4
32.14
  • 32.14
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.68e4
  • 1.68e4
28.75
  • 28.75
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.76e4
  • 1.76e4
25.46
  • 25.46
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.78e4
  • 1.78e4
24.35
  • 24.35
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
1.80e4
  • 1.80e4
  • 1.81e4
  • 1.87e4
  • 1.92e4
23.74
  • 23.74
  • 23.28
  • 20.75
  • 18.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.90e4
  • 1.90e4
19.27
  • 19.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Mammalia13 species13 genesCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000027997.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta1 geneCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000027997.

Cross-references

EnsemblENSSSCG00000027997 (NME5)
HGNCHGNC:7853 (NME5)
EMBLFP312853
Uniprot/SPTREMBLI3LN92, I3LN92_PIG

Do not show this banner again