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S. scrofa Gene: TCEAL3 - ENSSSCG00000028062 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000028062
NameTCEAL3
Description-
OrganismSus scrofa (pig)
Orthologs(s)29 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.96e3
  • 1.96e3
  • 4.38e3
91.68
  • 91.68
  • 81.43
AEIR
  • AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
2.10e3
  • 2.10e3
  • 3.80e3
91.09
  • 91.09
  • 83.89
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
2.51e3
  • 2.51e3
  • 2.83e3
  • 4.23e3
  • 4.79e3
89.36
  • 89.36
  • 87.99
  • 82.07
  • 79.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
3.45e3
  • 3.45e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
3.62e3
  • 3.62e3
84.64
  • 84.64
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
4.01e3
  • 4.01e3
83.01
  • 83.01
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
4.13e3
  • 4.13e3
82.48
  • 82.48
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
4.30e3
  • 4.30e3
81.78
  • 81.78
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
4.34e3
  • 4.34e3
81.62
  • 81.62
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
4.43e3
  • 4.43e3
81.24
  • 81.24
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
5.01e3
  • 5.01e3
78.75
  • 78.75
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
5.07e3
  • 5.07e3
78.51
  • 78.51
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
5.94e3
  • 5.94e3
74.84
  • 74.84
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
6.48e3
  • 6.48e3
72.54
  • 72.54
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
6.87e3
  • 6.87e3
70.88
  • 70.88
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.03e3
  • 7.03e3
70.22
  • 70.22
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.29e4
  • 1.29e4
  • 1.70e4
45.52
  • 45.52
  • 28.02
AEIR
  • AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
  • 1.62e4
45.09
  • 45.09
  • 31.19
AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
42.97
  • 42.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.37e4
  • 1.37e4
  • 1.43e4
  • 1.82e4
42.11
  • 42.11
  • 39.38
  • 22.82
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.41e4
  • 1.41e4
40.20
  • 40.20
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
39.43
  • 39.43
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
  • 1.65e4
  • 1.89e4
  • 1.99e4
39.37
  • 39.37
  • 29.94
  • 19.73
  • 15.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.55e4
  • 1.55e4
  • 1.88e4
34.47
  • 34.47
  • 20.20
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.56e4
  • 1.56e4
  • 1.74e4
33.99
  • 33.99
  • 26.33
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
  • 1.92e4
29.73
  • 29.73
  • 18.53
AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.68e4
  • 1.68e4
28.97
  • 28.97
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.77e4
  • 1.77e4
24.93
  • 24.93
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.80e4
  • 1.80e4
23.54
  • 23.54
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.85e4
  • 1.85e4
21.57
  • 21.57
AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.89e4
  • 1.89e4
19.74
  • 19.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Cetartiodactyla2 genesCompare expression

Paralogy information comes from OMA : ENSSSCG00000028062.

Cross-references

EnsemblENSSSCG00000028062 (TCEAL3)
EMBLCU480760, CU929828
Uniprot/SPTREMBLF1RYC9, F1RYC9_PIG

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