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S. scrofa Gene: RPLP1 - ENSSSCG00000028362 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000028362
NameRPLP1
Descriptionribosomal protein, large, P1 [Source:HGNC Symbol;Acc:HGNC:10372]
OrganismSus scrofa (pig)
Synonym(s)lp1
Orthologs(s)11 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
  • 1.12e4
54.71
  • 54.71
  • 52.56
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.16e4
  • 1.16e4
  • 1.64e4
50.87
  • 50.87
  • 30.30
AEIR
  • AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.22e4
  • 1.22e4
48.40
  • 48.40
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
46.35
  • 46.35
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
45.85
  • 45.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.34e4
  • 1.34e4
  • 1.55e4
  • 1.96e4
43.24
  • 43.24
  • 34.42
  • 17.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
41.68
  • 41.68
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0034919juvenile stage
1.40e4
  • 1.40e4
40.52
  • 40.52
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.43e4
  • 1.43e4
39.56
  • 39.56
AEIR
  • AEIR
UBERON:0002114duodenum
  • UBERON:0034919juvenile stage
1.45e4
  • 1.45e4
38.56
  • 38.56
AEIR
  • AEIR
UBERON:0000989penis
  • UBERON:0034919juvenile stage
1.51e4
  • 1.51e4
35.98
  • 35.98
AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
35.97
  • 35.97
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.52e4
  • 1.52e4
35.54
  • 35.54
AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.58e4
  • 1.58e4
32.92
  • 32.92
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0000068embryo stage
  • UBERON:0034919juvenile stage
1.61e4
  • 1.61e4
  • 1.67e4
  • 1.74e4
  • 1.92e4
31.85
  • 31.85
  • 29.07
  • 26.12
  • 18.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.71e4
  • 1.71e4
27.58
  • 27.58
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
1.76e4
  • 1.76e4
25.50
  • 25.50
AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
1.76e4
  • 1.76e4
25.37
  • 25.37
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
1.76e4
  • 1.76e4
25.24
  • 25.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.77e4
  • 1.77e4
  • 2.16e4
24.93
  • 24.93
  • 8.32
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.87e4
  • 1.87e4
20.56
  • 20.56
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.98e4
  • 1.98e4
  • 2.17e4
  • 2.19e4
15.96
  • 15.96
  • 8.06
  • 7.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
2.04e4
  • 2.04e4
13.71
  • 13.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Cross-references

EnsemblENSSSCG00000028362 (RPLP1)
HGNCHGNC:10372 (RPLP1)
EMBLCT797464, FP326712
Uniprot/SPTREMBLI3LFV6, I3LFV6_PIG

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