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S. scrofa Gene: SLC8A2 - ENSSSCG00000029567 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000029567
NameSLC8A2
Descriptionsolute carrier family 8 (sodium/calcium exchanger), member 2 [Source:HGNC Symbol;Acc:HGNC:11069]
OrganismSus scrofa (pig)
Synonym(s)kiaa1087, ncx2
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
994
  • 994
  • 4.74e3
95.79
  • 95.79
  • 79.90
AEIR
  • AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.02e3
  • 1.02e3
  • 1.12e3
  • 1.43e3
  • 2.86e3
95.69
  • 95.69
  • 95.27
  • 93.95
  • 87.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.32e3
  • 1.32e3
94.39
  • 94.39
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.34e3
  • 1.34e3
  • 6.81e3
94.34
  • 94.34
  • 71.14
AEIR
  • AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
2.53e3
  • 2.53e3
89.30
  • 89.30
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
5.16e3
  • 5.16e3
78.13
  • 78.13
AEIR
  • AEIR
UBERON:0002336corpus callosum
  • UBERON:0034919juvenile stage
7.54e3
  • 7.54e3
68.06
  • 68.06
AEIR
  • AEIR
UBERON:0002421hippocampal formation
  • UBERON:0034919juvenile stage
8.41e3
  • 8.41e3
64.35
  • 64.35
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
9.13e3
  • 9.13e3
  • 1.21e4
  • 1.30e4
61.29
  • 61.29
  • 48.55
  • 44.70
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001897dorsal plus ventral thalamus
  • UBERON:0034919juvenile stage
9.24e3
  • 9.24e3
60.82
  • 60.82
AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
9.44e3
  • 9.44e3
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0018685nursing stage
9.69e3
  • 9.69e3
  • 1.30e4
  • 1.43e4
  • 1.53e4
  • 1.62e4
58.94
  • 58.94
  • 44.92
  • 39.58
  • 35.17
  • 31.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001876amygdala
  • UBERON:0034919juvenile stage
1.01e4
  • 1.01e4
57.20
  • 57.20
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.83
  • 54.83
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.55e4
47.51
  • 47.51
  • 34.22
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.35e4
  • 1.35e4
42.98
  • 42.98
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.36e4
  • 1.36e4
42.54
  • 42.54
AEIR
  • AEIR
UBERON:0000988pons
  • UBERON:0034919juvenile stage
1.36e4
  • 1.36e4
42.23
  • 42.23
AEIR
  • AEIR
UBERON:0001896medulla oblongata
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
41.34
  • 41.34
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0018685nursing stage
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
  • 1.62e4
39.61
  • 39.61
  • 31.14
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.44e4
  • 1.44e4
38.90
  • 38.90
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.45e4
  • 1.45e4
38.71
  • 38.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.51e4
  • 1.51e4
36.14
  • 36.14
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.58e4
  • 1.58e4
33.11
  • 33.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.59e4
  • 1.59e4
32.46
  • 32.46
AEIR
  • AEIR
UBERON:0005316endocardial endothelium
  • UBERON:0034919juvenile stage
1.60e4
  • 1.60e4
32.32
  • 32.32
AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.61e4
  • 1.61e4
  • 1.74e4
31.87
  • 31.87
  • 26.13
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
  • 1.79e4
31.26
  • 31.26
  • 24.30
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.72e4
  • 1.72e4
  • 1.84e4
27.28
  • 27.28
  • 21.88
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.75e4
  • 1.75e4
25.85
  • 25.85
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.95e4
  • 1.95e4
17.16
  • 17.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria4 species4 genesCompare expression
Boreoeutheria12 species12 genesCompare expression
Tetrapoda13 species13 genesCompare expression
Euteleostomi14 species14 genesCompare expression
Bilateria21 species22 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000029567.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSSSCG00000029567.

Cross-references

EnsemblENSSSCG00000029567 (SLC8A2)
HGNCHGNC:11069 (SLC8A2)
EMBLFP104555
Uniprot/SPTREMBLI3LDT5, I3LDT5_PIG

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