S. scrofa Gene: SPATA22 - ENSSSCG00000029709 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000029709
NameSPATA22
Descriptionspermatogenesis associated 22 [Source:HGNC Symbol;Acc:HGNC:30705]
OrganismSus scrofa (pig)
Synonym(s)nyd-sp20
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
480
  • 480
  • 1.13e3
97.97
  • 97.97
  • 95.23
AEIR
  • AEIR
  • AEIR
CL:0000023oocyte
  • UBERON:0034919juvenile stage
4.84e3
  • 4.84e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0018241prime adult stage
1.03e4
  • 1.03e4
  • 1.27e4
  • 1.69e4
56.18
  • 56.18
  • 46.33
  • 28.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000029lymph node
  • UBERON:0018241prime adult stage
1.05e4
  • 1.05e4
55.62
  • 55.62
AEIR
  • AEIR
UBERON:0002372tonsil
  • UBERON:0034919juvenile stage
1.07e4
  • 1.07e4
54.53
  • 54.53
AEIR
  • AEIR
UBERON:0001301epididymis
  • UBERON:0034919juvenile stage
1.08e4
  • 1.08e4
54.20
  • 54.20
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.20e4
  • 1.20e4
  • 1.89e4
49.33
  • 49.33
  • 19.96
AEIR
  • AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018685nursing stage
  • UBERON:0018241prime adult stage
1.24e4
  • 1.24e4
  • 1.47e4
47.51
  • 47.51
  • 37.61
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000104life cycle
1.32e4
  • 1.32e4
44.00
  • 44.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
1.34e4
  • 1.34e4
  • 1.86e4
  • 2.07e4
43.06
  • 43.06
  • 21.18
  • 12.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002190subcutaneous adipose tissue
  • UBERON:0000104life cycle
  • UBERON:0018685nursing stage
1.42e4
  • 1.42e4
  • 1.50e4
39.77
  • 39.77
  • 36.45
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
  • UBERON:0018241prime adult stage
1.54e4
  • 1.54e4
  • 1.92e4
34.82
  • 34.82
  • 18.78
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.56e4
  • 1.56e4
33.69
  • 33.69
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
31.25
  • 31.25
AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.64e4
  • 1.64e4
30.40
  • 30.40
AEIR
  • AEIR
UBERON:0001114right lobe of liver
  • UBERON:0034919juvenile stage
1.66e4
  • 1.66e4
29.46
  • 29.46
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.70e4
  • 1.70e4
27.84
  • 27.84
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
1.77e4
  • 1.77e4
25.14
  • 25.14
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.78e4
  • 1.78e4
24.59
  • 24.59
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.79e4
  • 1.79e4
23.96
  • 23.96
AEIR
  • AEIR
UBERON:0002298brainstem
  • UBERON:0034919juvenile stage
1.80e4
  • 1.80e4
23.83
  • 23.83
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018685nursing stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
  • UBERON:0000068embryo stage
1.83e4
  • 1.83e4
  • 1.96e4
  • 2.02e4
  • 2.02e4
22.43
  • 22.43
  • 16.71
  • 14.31
  • 14.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.88e4
  • 1.88e4
20.45
  • 20.45
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
  • UBERON:0000112sexually immature stage
1.92e4
  • 1.92e4
  • 2.12e4
  • 2.17e4
  • 2.19e4
18.68
  • 18.68
  • 9.98
  • 8.06
  • 7.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.93e4
  • 1.93e4
17.99
  • 17.99
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
2.03e4
  • 2.03e4
13.78
  • 13.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Cetartiodactyla1 species1 geneCompare expression
Laurasiatheria5 species5 genesCompare expression
Boreoeutheria13 species13 genesCompare expression
Amniota14 species14 genesCompare expression

Orthology information comes from OMA : ENSSSCG00000029709.

Cross-references

EnsemblENSSSCG00000029709 (SPATA22)
HGNCHGNC:30705 (SPATA22)
EMBLFP236366
Uniprot/SPTREMBLI3LJQ4, I3LJQ4_PIG

Do not show this banner again