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S. scrofa Gene: CH242-477H4.3 - ENSSSCG00000030774 - Sus scrofa (pig)

General information

Ensembl IDENSSSCG00000030774
NameCH242-477H4.3
Description-
OrganismSus scrofa (pig)
Orthologs(s)7 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001383muscle of leg
  • UBERON:0018685nursing stage
1.12e3
  • 1.12e3
95.26
  • 95.26
AEIR
  • AEIR
UBERON:0001401longissimus thoracis muscle
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
8.13e3
  • 8.13e3
  • 1.21e4
  • 2.05e4
65.54
  • 65.54
  • 48.91
  • 13.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0018241prime adult stage
  • UBERON:0034919juvenile stage
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
  • 1.92e4
  • 2.16e4
50.59
  • 50.59
  • 18.58
  • 8.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0018241prime adult stage
1.21e4
  • 1.21e4
48.62
  • 48.62
AEIR
  • AEIR
UBERON:0016540occipital cortex
  • UBERON:0018241prime adult stage
1.26e4
  • 1.26e4
46.69
  • 46.69
AEIR
  • AEIR
UBERON:0000995uterus
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0018685nursing stage
1.30e4
  • 1.30e4
  • 1.51e4
44.77
  • 44.77
  • 36.15
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
  • 2.18e4
44.65
  • 44.65
  • 7.71
AEIR
  • AEIR
  • AEIR
CL:0000501granulosa cell
  • UBERON:0034919juvenile stage
1.38e4
  • 1.38e4
41.52
  • 41.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0018241prime adult stage
1.48e4
  • 1.48e4
37.24
  • 37.24
AEIR
  • AEIR
UBERON:0001013adipose tissue
  • UBERON:0018241prime adult stage
1.51e4
  • 1.51e4
36.12
  • 36.12
AEIR
  • AEIR
UBERON:0001954Ammon's horn
  • UBERON:0018685nursing stage
1.51e4
  • 1.51e4
36.12
  • 36.12
AEIR
  • AEIR
UBERON:0001870frontal cortex
  • UBERON:0018241prime adult stage
  • UBERON:0000112sexually immature stage
  • UBERON:0000104life cycle
  • UBERON:0034919juvenile stage
1.53e4
  • 1.53e4
  • 1.75e4
  • 1.92e4
  • 2.12e4
35.01
  • 35.01
  • 25.88
  • 18.62
  • 10.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • UBERON:0018685nursing stage
1.54e4
  • 1.54e4
34.58
  • 34.58
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.59e4
  • 1.59e4
32.52
  • 32.52
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • UBERON:0018241prime adult stage
1.62e4
  • 1.62e4
31.40
  • 31.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0018241prime adult stage
  • UBERON:0000104life cycle
1.62e4
  • 1.62e4
  • 2.06e4
31.24
  • 31.24
  • 12.74
AEIR
  • AEIR
  • AEIR
UBERON:0000451prefrontal cortex
  • UBERON:0018241prime adult stage
1.66e4
  • 1.66e4
29.62
  • 29.62
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.73e4
  • 1.73e4
26.76
  • 26.76
AEIR
  • AEIR
UBERON:0001298psoas major muscle
  • UBERON:0018685nursing stage
1.80e4
  • 1.80e4
23.78
  • 23.78
AEIR
  • AEIR
UBERON:0000082adult mammalian kidney
  • UBERON:0018241prime adult stage
1.85e4
  • 1.85e4
21.69
  • 21.69
AEIR
  • AEIR
UBERON:0002037cerebellum
  • UBERON:0018241prime adult stage
1.87e4
  • 1.87e4
20.60
  • 20.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Orthology information comes from OMA : ENSSSCG00000030774.

Paralogs (same species)

Cross-references

EnsemblENSSSCG00000030774 (CH242-477H4.3)

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