X. tropicalis Gene: prdx1 - ENSXETG00000003501 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000003501
Nameprdx1
Descriptionperoxiredoxin 1 [Source:Xenbase;Acc:XB-GENE-481165]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)msp23, nkefa, pag, paga, pagb, prx-1, prx1, prxi, prxi-1, tdpx2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
600
  • 600
96.75582
  • 96.75582
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
658
  • 658
96.44146
  • 96.44146
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
823
  • 823
95.54974
  • 95.54974
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • UBERON:00072368 cell stage
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • UBERON:00072334 cell stage
  • UBERON:00072322 cell stage
856
  • 856
  • 857
  • 2.81e3
  • 3.50e3
  • 3.63e3
  • 3.80e3
  • 5.66e3
  • 5.84e3
  • 8.21e3
  • 8.40e3
  • 9.18e3
  • 9.28e3
95.37087
  • 95.37087
  • 95.36546
  • 84.77271
  • 81.07272
  • 80.33590
  • 79.44716
  • 69.35239
  • 68.40029
  • 55.53871
  • 54.51002
  • 50.29237
  • 49.75636
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
1.12e3
  • 1.12e3
  • 5.38e3
  • 6.64e3
93.95236
  • 93.95236
  • 70.87028
  • 64.07997
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.31e3
  • 1.31e3
92.89284
  • 92.89284
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.43e3
  • 1.43e3
92.27733
  • 92.27733
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
2.39e3
  • 2.39e3
87.05024
  • 87.05024
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.48e3
  • 2.48e3
86.60394
  • 86.60394
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.12e3
  • 3.12e3
83.13481
  • 83.13481
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
4.10e3
  • 4.10e3
  • 8.29e3
77.81148
  • 77.81148
  • 55.12182
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAMC01001981
EnsemblENSXETG00000003501 (prdx1)
Uniprot/SPTREMBLF6YM74, F6YM74_XENTR
XenbaseXB-GENE-481165 (prdx1)

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