X. tropicalis Gene: prdx1 - ENSXETG00000003501 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000003501
Nameprdx1
Descriptionperoxiredoxin 1 [Source:Xenbase;Acc:XB-GENE-481165]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)msp23, nkefa, pag, paga, pagb, prx-1, prx1, prxi, prxi-1, tdpx2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • UBERON:0000106zygote stage
  • UBERON:00072368 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072322 cell stage
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
418
  • 418
  • 421
  • 429
  • 639
  • 767
  • 819
  • 917
  • 933
  • 1.13e3
  • 1.15e3
  • 1.16e3
  • 1.18e3
  • 1.18e3
  • 1.19e3
  • 1.20e3
  • 1.21e3
  • 1.23e3
  • 1.26e3
  • 1.26e3
  • 1.26e3
  • 1.27e3
  • 1.36e3
  • 1.37e3
  • 1.38e3
  • 1.40e3
  • 1.41e3
  • 1.46e3
  • 1.59e3
  • 1.61e3
  • 1.68e3
  • 1.74e3
  • 1.90e3
  • 2.08e3
  • 2.12e3
  • 2.40e3
  • 2.96e3
  • 3.18e3
  • 3.28e3
  • 3.68e3
  • 4.16e3
  • 8.40e3
97.75655
  • 97.75655
  • 97.74052
  • 97.69629
  • 96.57013
  • 95.87884
  • 95.59821
  • 95.07182
  • 94.98671
  • 93.91386
  • 93.81482
  • 93.75978
  • 93.64976
  • 93.63254
  • 93.62587
  • 93.54979
  • 93.50621
  • 93.36370
  • 93.23748
  • 93.22586
  • 93.20235
  • 93.16189
  • 92.66186
  • 92.61817
  • 92.58611
  • 92.45968
  • 92.40388
  • 92.17302
  • 91.42546
  • 91.34341
  • 90.98149
  • 90.63162
  • 89.78969
  • 88.84043
  • 88.58320
  • 87.07457
  • 84.06462
  • 82.87136
  • 82.33513
  • 80.18852
  • 77.62942
  • 54.79636
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
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  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
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  • AEIR
  • AEIR
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  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
600
  • 600
96.77630
  • 96.77630
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
658
  • 658
96.46430
  • 96.46430
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
823
  • 823
95.57782
  • 95.57782
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
1.12e3
  • 1.12e3
  • 5.38e3
  • 6.64e3
93.99042
  • 93.99042
  • 71.05385
  • 64.30602
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.31e3
  • 1.31e3
92.93834
  • 92.93834
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.43e3
  • 1.43e3
92.32603
  • 92.32603
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
2.39e3
  • 2.39e3
87.13111
  • 87.13111
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
2.48e3
  • 2.48e3
86.68887
  • 86.68887
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.12e3
  • 3.12e3
83.24097
  • 83.24097
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
4.10e3
  • 4.10e3
  • 8.29e3
77.95384
  • 77.95384
  • 55.40431
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAMC01001981
EnsemblENSXETG00000003501 (prdx1)
Uniprot/SPTREMBLF6YM74, F6YM74_XENTR
XenbaseXB-GENE-481165 (prdx1)

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