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X. tropicalis Gene: cat.2 - ENSXETG00000003981 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000003981
Namecat.2
Descriptioncatalase, gene 2 [Source:Xenbase;Acc:XB-GENE-976955]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)catalase, loc548403
Orthologs(s)30 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
178
  • 178
99.05
  • 99.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
200
  • 200
98.93
  • 98.93
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.23e3
  • 1.23e3
93.39
  • 93.39
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.77e3
  • 1.77e3
90.49
  • 90.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.16e3
  • 2.16e3
88.38
  • 88.38
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • UBERON:00072334 cell stage
  • UBERON:00072322 cell stage
  • XAO:1000046NF stage 31 (Xenopus)
  • UBERON:00072368 cell stage
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • UBERON:0000106zygote stage
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
2.20e3
  • 2.20e3
  • 2.52e3
  • 2.61e3
  • 2.63e3
  • 3.91e3
  • 3.98e3
  • 4.09e3
  • 4.96e3
  • 5.08e3
  • 5.09e3
  • 5.22e3
  • 5.45e3
  • 5.56e3
  • 5.63e3
  • 5.89e3
  • 5.90e3
  • 5.99e3
  • 6.08e3
  • 6.10e3
  • 7.43e3
  • 7.73e3
  • 7.91e3
  • 8.37e3
  • 8.63e3
  • 9.77e3
  • 1.03e4
  • 1.04e4
  • 1.04e4
  • 1.05e4
  • 1.06e4
  • 1.07e4
  • 1.09e4
  • 1.12e4
  • 1.13e4
  • 1.15e4
  • 1.16e4
  • 1.16e4
  • 1.17e4
  • 1.18e4
  • 1.18e4
  • 1.20e4
88.15
  • 88.15
  • 86.44
  • 85.99
  • 85.84
  • 78.96
  • 78.60
  • 78.00
  • 73.31
  • 72.67
  • 72.62
  • 71.89
  • 70.66
  • 70.11
  • 69.74
  • 68.31
  • 68.24
  • 67.80
  • 67.32
  • 67.19
  • 60.03
  • 58.41
  • 57.43
  • 54.99
  • 53.57
  • 47.44
  • 44.37
  • 43.98
  • 43.82
  • 43.49
  • 43.12
  • 42.40
  • 41.33
  • 39.63
  • 39.46
  • 38.17
  • 37.75
  • 37.73
  • 37.09
  • 36.41
  • 36.38
  • 35.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000113post-juvenile adult stage
2.52e3
  • 2.52e3
86.43
  • 86.43
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
3.86e3
  • 3.86e3
79.22
  • 79.22
AEIR
  • AEIR
UBERON:0002108small intestine
  • UBERON:0000113post-juvenile adult stage
  • XAO:1000078NF stage 66 (Xenopus)
  • XAO:1000075NF stage 63 (Xenopus)
3.88e3
  • 3.88e3
  • 8.19e3
  • 8.84e3
79.13
  • 79.13
  • 55.95
  • 52.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
4.62e3
  • 4.62e3
  • 6.23e3
75.18
  • 75.18
  • 66.51
AEIR
  • AEIR
  • AEIR
UBERON:0003428gonadal fat pad
  • UBERON:0000113post-juvenile adult stage
6.11e3
  • 6.11e3
67.14
  • 67.14
AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
6.54e3
  • 6.54e3
64.83
  • 64.83
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
6.65e3
  • 6.65e3
64.21
  • 64.21
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
7.63e3
  • 7.63e3
  • 9.82e3
  • 1.17e4
58.95
  • 58.95
  • 47.18
  • 37.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.22e3
  • 8.22e3
55.77
  • 55.77
AEIR
  • AEIR
UBERON:0001017central nervous system
  • XAO:1000091climax stage (Xenopus)
8.54e3
  • 8.54e3
54.05
  • 54.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda18 species20 genesCompare expression
Euteleostomi19 species21 genesCompare expression
Bilateria26 species30 genesCompare expression

Orthology information comes from OMA : ENSXETG00000003981.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Sarcopterygii2 genesCompare expression

Paralogy information comes from OMA : ENSXETG00000003981.

Cross-references

EnsemblENSXETG00000003981 (cat.2)
XenbaseXB-GENE-976955 (cat.2)
EMBLAAMC01029703, AAMC01029704, BC123048
Uniprot/SPTREMBLQ05B04, Q05B04_XENTR

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