X. tropicalis Gene: rasgrf1 - ENSXETG00000007848 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000007848
Namerasgrf1
DescriptionRas protein-specific guanine nucleotide-releasing factor 1 [Source:Xenbase;Acc:XB-GENE-493672]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)16 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
2.12e3
  • 2.12e3
88.62
  • 88.62
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • XAO:1000080late tailbud stage (Xenopus)
9.36e3
  • 9.36e3
49.63
  • 49.63
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
1.10e4
  • 1.10e4
  • 1.20e4
  • 1.22e4
  • 1.23e4
  • 1.27e4
  • 1.28e4
  • 1.32e4
  • 1.32e4
  • 1.32e4
  • 1.34e4
  • 1.35e4
  • 1.35e4
  • 1.36e4
  • 1.36e4
  • 1.36e4
  • 1.37e4
  • 1.39e4
  • 1.40e4
  • 1.40e4
  • 1.42e4
  • 1.44e4
  • 1.45e4
  • 1.49e4
  • 1.50e4
  • 1.54e4
  • 1.54e4
40.59
  • 40.59
  • 35.59
  • 34.16
  • 33.87
  • 31.61
  • 31.08
  • 29.08
  • 28.96
  • 28.78
  • 27.95
  • 27.61
  • 27.17
  • 26.76
  • 26.74
  • 26.64
  • 26.10
  • 25.03
  • 24.85
  • 24.73
  • 23.45
  • 22.61
  • 22.13
  • 19.81
  • 19.52
  • 17.17
  • 17.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
35.81
  • 35.81
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
1.30e4
  • 1.30e4
29.81
  • 29.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression

Orthology information comes from OMA : ENSXETG00000007848.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eumetazoa3 genesCompare expression

Paralogy information comes from OMA : ENSXETG00000007848.

Cross-references

EnsemblENSXETG00000007848 (rasgrf1)
XenbaseXB-GENE-493672 (rasgrf1)
EMBLAAMC01017408
Uniprot/SPTREMBLF6THM7, F6THM7_XENTR

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