X. tropicalis Gene: slc1a7 - ENSXETG00000008068 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000008068
Nameslc1a7
Descriptionsolute carrier family 1 (glutamate transporter), member 7 [Source:Xenbase;Acc:XB-GENE-979919]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)aaat
Orthologs(s)19 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
43.10
  • 43.10
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • UBERON:00072368 cell stage
  • XAO:1000040NF stage 24 (Xenopus)
  • UBERON:00072334 cell stage
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
1.12e4
  • 1.12e4
  • 1.13e4
  • 1.19e4
  • 1.21e4
  • 1.24e4
  • 1.24e4
  • 1.25e4
  • 1.25e4
  • 1.26e4
  • 1.26e4
  • 1.27e4
  • 1.27e4
  • 1.33e4
  • 1.33e4
  • 1.33e4
  • 1.36e4
  • 1.36e4
  • 1.39e4
  • 1.44e4
  • 1.46e4
  • 1.47e4
  • 1.53e4
  • 1.57e4
  • 1.58e4
  • 1.58e4
  • 1.59e4
  • 1.61e4
  • 1.62e4
39.53
  • 39.53
  • 38.95
  • 36.03
  • 35.02
  • 33.43
  • 33.33
  • 32.60
  • 32.59
  • 32.36
  • 31.99
  • 31.92
  • 31.53
  • 28.64
  • 28.48
  • 28.44
  • 27.02
  • 26.68
  • 25.20
  • 22.66
  • 21.69
  • 21.05
  • 17.94
  • 15.80
  • 15.12
  • 14.78
  • 14.31
  • 13.52
  • 12.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
38.01
  • 38.01
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
33.07
  • 33.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
1.26e4
  • 1.26e4
  • 1.30e4
  • 1.31e4
32.31
  • 32.31
  • 29.90
  • 29.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.48e4
  • 1.48e4
20.13
  • 20.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSXETG00000008068.

Paralogs (same species)

Paralogy information comes from OMA : ENSXETG00000008068.

Cross-references

EnsemblENSXETG00000008068 (slc1a7)
XenbaseXB-GENE-979919 (slc1a7)
EMBLAAMC01000460
Uniprot/SPTREMBLF6SMQ6, F6SMQ6_XENTR

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