X. tropicalis Gene: casq1 - ENSXETG00000008124 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000008124
Namecasq1
Descriptioncalsequestrin 1 (fast-twitch, skeletal muscle) [Source:Xenbase;Acc:XB-GENE-5753698]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)casq, pdib1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
36.0
  • 36.0
99.81170
  • 99.81170
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
733
  • 733
  • 910
  • 1.11e3
  • 1.17e3
  • 1.44e3
  • 1.48e3
  • 1.66e3
  • 2.16e3
  • 4.47e3
  • 5.19e3
  • 5.34e3
  • 6.48e3
  • 6.64e3
  • 6.75e3
  • 8.33e3
  • 8.36e3
  • 9.00e3
  • 9.46e3
  • 1.02e4
  • 1.09e4
  • 1.10e4
  • 1.22e4
  • 1.27e4
  • 1.34e4
  • 1.44e4
  • 1.46e4
  • 1.66e4
96.06203
  • 96.06203
  • 95.10749
  • 94.05993
  • 93.71270
  • 92.25152
  • 92.03502
  • 91.08506
  • 88.39275
  • 75.96169
  • 72.06219
  • 71.29930
  • 65.15855
  • 64.29225
  • 63.70539
  • 55.20525
  • 55.00301
  • 51.60564
  • 49.08323
  • 45.03352
  • 41.43966
  • 40.74907
  • 34.22763
  • 31.89347
  • 27.89783
  • 22.27869
  • 21.53478
  • 10.59644
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007812post-anal tail
  • XAO:1000079metamorphosing tadpole stage (Xenopus)
2.38e3
  • 2.38e3
87.20713
  • 87.20713
AEIR
  • AEIR
UBERON:0002101limb
  • XAO:1000079metamorphosing tadpole stage (Xenopus)
3.02e3
  • 3.02e3
83.75687
  • 83.75687
AEIR
  • AEIR
UBERON:0001474bone element
  • UBERON:0000113post-juvenile adult stage
3.19e3
  • 3.19e3
82.86512
  • 82.86512
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.04e3
  • 6.04e3
67.48631
  • 67.48631
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • XAO:1000080late tailbud stage (Xenopus)
  • UBERON:0000104life cycle
  • XAO:1000074NF stage 62 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000007tailbud stage (Xenopus)
6.82e3
  • 6.82e3
  • 8.75e3
  • 8.81e3
  • 8.85e3
  • 8.93e3
63.30242
  • 63.30242
  • 52.95228
  • 52.59111
  • 52.39711
  • 51.93512
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.95e3
  • 7.95e3
57.22505
  • 57.22505
AEIR
  • AEIR
UBERON:0000033head
  • XAO:1000007tailbud stage (Xenopus)
9.08e3
  • 9.08e3
51.16307
  • 51.16307
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • XAO:1000022NF stage 12 (Xenopus)
9.23e3
  • 9.23e3
  • 1.31e4
50.36671
  • 50.36671
  • 29.48297
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
44.27578
  • 44.27578
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
1.20e4
  • 1.20e4
35.55151
  • 35.55151
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
30.98251
  • 30.98251
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
26.09109
  • 26.09109
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.50e4
  • 1.50e4
19.29090
  • 19.29090
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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