X. tropicalis Gene: - ENSXETG00000009666 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000009666
Name-
Description-
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)13 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
9.15e3
  • 9.15e3
  • 1.22e4
50.76
  • 50.76
  • 34.17
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • UBERON:00072368 cell stage
  • UBERON:00072334 cell stage
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • UBERON:00072322 cell stage
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
9.80e3
  • 9.80e3
  • 1.25e4
  • 1.32e4
  • 1.39e4
  • 1.43e4
  • 1.47e4
  • 1.47e4
  • 1.49e4
  • 1.49e4
  • 1.52e4
  • 1.52e4
  • 1.54e4
  • 1.55e4
  • 1.56e4
  • 1.58e4
  • 1.58e4
  • 1.59e4
  • 1.60e4
  • 1.61e4
  • 1.63e4
  • 1.67e4
  • 1.69e4
  • 1.79e4
47.29
  • 47.29
  • 32.84
  • 28.96
  • 25.02
  • 22.89
  • 21.18
  • 20.92
  • 19.88
  • 19.65
  • 18.43
  • 18.04
  • 17.02
  • 16.65
  • 16.13
  • 15.04
  • 14.93
  • 14.49
  • 14.12
  • 13.57
  • 12.13
  • 10.39
  • 8.82
  • 3.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
1.04e4
  • 1.04e4
  • 1.27e4
  • 1.52e4
43.98
  • 43.98
  • 31.76
  • 18.25
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
43.29
  • 43.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.18e4
  • 1.18e4
36.66
  • 36.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Cross-references

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