We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

X. tropicalis Gene: - ENSXETG00000011648 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000011648
Name-
Description-
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)18 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.85e3
  • 7.85e3
57.78
  • 57.78
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
9.55e3
  • 9.55e3
48.62
  • 48.62
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000109gastrula stage
1.43e4
  • 1.43e4
  • 1.65e4
23.09
  • 23.09
  • 11.36
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
1.46e4
  • 1.46e4
  • 1.52e4
  • 1.63e4
  • 1.65e4
  • 1.67e4
  • 1.67e4
  • 1.70e4
  • 1.71e4
  • 1.71e4
  • 1.71e4
  • 1.72e4
  • 1.72e4
  • 1.74e4
  • 1.78e4
21.27
  • 21.27
  • 18.41
  • 12.32
  • 11.25
  • 10.11
  • 9.94
  • 8.77
  • 8.16
  • 8.10
  • 8.08
  • 7.46
  • 7.29
  • 6.24
  • 4.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSXETG00000011648.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda1 geneCompare expression

Paralogy information comes from OMA : ENSXETG00000011648.

Cross-references

Do not show this banner again