X. tropicalis Gene: XB-GENE-5860197 - ENSXETG00000012091 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000012091
NameXB-GENE-5860197
Descriptionglutamate receptor KA2 [Source:Xenbase;Acc:XB-GENE-5860197]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)4 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
263
  • 263
98.59
  • 98.59
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • UBERON:00072368 cell stage
1.67e3
  • 1.67e3
  • 1.77e3
  • 2.16e3
  • 2.61e3
  • 2.68e3
  • 3.01e3
  • 3.68e3
  • 4.37e3
  • 5.37e3
  • 7.12e3
  • 7.36e3
  • 7.65e3
  • 7.90e3
  • 7.93e3
  • 1.00e4
  • 1.11e4
  • 1.20e4
  • 1.36e4
  • 1.39e4
  • 1.47e4
  • 1.50e4
  • 1.51e4
  • 1.53e4
  • 1.54e4
91.02
  • 91.02
  • 90.48
  • 88.38
  • 85.98
  • 85.58
  • 83.83
  • 80.20
  • 76.52
  • 71.10
  • 61.73
  • 60.41
  • 58.84
  • 57.52
  • 57.33
  • 45.95
  • 40.17
  • 35.58
  • 26.86
  • 25.20
  • 21.00
  • 19.11
  • 18.87
  • 17.62
  • 17.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.21e3
  • 6.21e3
66.61
  • 66.61
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.30e3
  • 7.30e3
60.74
  • 60.74
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
9.73e3
  • 9.73e3
47.67
  • 47.67
AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
41.40
  • 41.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
40.51
  • 40.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
1.15e4
  • 1.15e4
  • 1.47e4
38.23
  • 38.23
  • 20.69
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.33e4
  • 1.33e4
28.56
  • 28.56
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.46e4
  • 1.46e4
21.44
  • 21.44
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
17.32
  • 17.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSXETG00000012091 (XB-GENE-5860197)
XenbaseXB-GENE-5860197
EMBLAAMC01059538, AAMC01059539, BC122905
Uniprot/SPTREMBLQ0IHY8, Q0IHY8_XENTR

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