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X. tropicalis Gene: aoc3 - ENSXETG00000012588 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000012588
Nameaoc3
Descriptionamine oxidase, copper containing 3 [Source:Xenbase;Acc:XB-GENE-941577]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)aoc2
Orthologs(s)31 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
713
  • 713
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.73e3
  • 1.73e3
90.72
  • 90.72
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
2.43e3
  • 2.43e3
86.94
  • 86.94
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
3.14e3
  • 3.14e3
83.12
  • 83.12
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
5.99e3
  • 5.99e3
  • 6.37e3
  • 6.71e3
  • 6.93e3
  • 7.09e3
  • 7.36e3
  • 7.47e3
  • 7.63e3
  • 7.86e3
  • 8.96e3
  • 8.98e3
  • 9.16e3
  • 9.17e3
  • 9.36e3
  • 1.00e4
  • 1.08e4
  • 1.15e4
  • 1.25e4
  • 1.30e4
  • 1.32e4
  • 1.42e4
  • 1.44e4
  • 1.49e4
  • 1.58e4
  • 1.63e4
67.81
  • 67.81
  • 65.75
  • 63.93
  • 62.72
  • 61.88
  • 60.38
  • 59.81
  • 58.95
  • 57.71
  • 51.81
  • 51.68
  • 50.73
  • 50.65
  • 49.63
  • 46.23
  • 41.66
  • 37.89
  • 32.69
  • 30.12
  • 28.72
  • 23.40
  • 22.48
  • 20.09
  • 15.05
  • 12.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
7.25e3
  • 7.25e3
60.99
  • 60.99
AEIR
  • AEIR
UBERON:0003101male organism
  • UBERON:0000113post-juvenile adult stage
8.62e3
  • 8.62e3
53.64
  • 53.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.08e4
  • 1.08e4
41.75
  • 41.75
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
40.82
  • 40.82
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000109gastrula stage
1.29e4
  • 1.29e4
  • 1.30e4
30.72
  • 30.72
  • 29.93
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.49e4
  • 1.49e4
20.04
  • 20.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda14 species30 genesCompare expression
Euteleostomi15 species31 genesCompare expression

Orthology information comes from OMA : ENSXETG00000012588.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Xenopus1 geneCompare expression
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSXETG00000012588.

Cross-references

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