X. tropicalis Gene: mlc1 - ENSXETG00000014530 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000014530
Namemlc1
Descriptionmegalencephalic leukoencephalopathy with subcortical cysts 1 [Source:Xenbase;Acc:XB-GENE-976258]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)lvm, mlc, mlc1-3
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
2.03e3
  • 2.03e3
89.07
  • 89.07
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
5.64e3
  • 5.64e3
69.67
  • 69.67
AEIR
  • AEIR
UBERON:0001017central nervous system
  • XAO:1000091climax stage (Xenopus)
9.12e3
  • 9.12e3
50.92
  • 50.92
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • XAO:1000080late tailbud stage (Xenopus)
9.30e3
  • 9.30e3
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.66e3
  • 9.66e3
48.01
  • 48.01
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.70e3
  • 9.70e3
47.83
  • 47.83
AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
45.08
  • 45.08
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000106zygote stage
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • UBERON:00072368 cell stage
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • UBERON:00072322 cell stage
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:00072334 cell stage
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
1.08e4
  • 1.08e4
  • 1.09e4
  • 1.11e4
  • 1.11e4
  • 1.12e4
  • 1.17e4
  • 1.18e4
  • 1.19e4
  • 1.19e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.30e4
  • 1.31e4
  • 1.37e4
  • 1.45e4
  • 1.46e4
  • 1.46e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.51e4
  • 1.51e4
  • 1.58e4
  • 1.59e4
  • 1.60e4
  • 1.69e4
41.76
  • 41.76
  • 41.44
  • 40.54
  • 40.28
  • 39.80
  • 36.88
  • 36.71
  • 36.13
  • 35.91
  • 35.33
  • 33.75
  • 32.86
  • 30.08
  • 29.29
  • 26.24
  • 21.95
  • 21.56
  • 21.37
  • 20.56
  • 20.55
  • 20.27
  • 18.72
  • 18.54
  • 14.90
  • 14.47
  • 13.81
  • 8.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
1.20e4
  • 1.20e4
  • 1.21e4
35.52
  • 35.52
  • 34.97
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000109gastrula stage
1.21e4
  • 1.21e4
  • 1.27e4
  • 1.65e4
34.72
  • 34.72
  • 31.82
  • 11.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
21.51
  • 21.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSXETG00000014530.

Cross-references

Do not show this banner again