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X. tropicalis Gene: ccdc122 - ENSXETG00000014774 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000014774
Nameccdc122
Descriptioncoiled-coil domain containing 122 [Source:Xenbase;Acc:XB-GENE-989470]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.15e3
  • 5.15e3
72.32
  • 72.32
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
42.71
  • 42.71
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000017NF stage 7 (Xenopus)
  • UBERON:00072368 cell stage
  • UBERON:0000106zygote stage
  • XAO:1000018NF stage 8 (Xenopus)
  • UBERON:00072334 cell stage
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • UBERON:00072322 cell stage
1.09e4
  • 1.09e4
  • 1.17e4
  • 1.22e4
  • 1.32e4
  • 1.32e4
  • 1.33e4
  • 1.35e4
  • 1.45e4
  • 1.46e4
41.12
  • 41.12
  • 37.29
  • 34.28
  • 29.18
  • 29.10
  • 28.35
  • 27.48
  • 21.81
  • 21.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
1.68e4
  • 1.68e4
9.40
  • 9.40
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSXETG00000014774 (ccdc122)
XenbaseXB-GENE-989470 (ccdc122)
EMBLAAMC01066427
Uniprot/SPTREMBLF7CHU3, F7CHU3_XENTR

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