X. tropicalis Gene: ccr2 - ENSXETG00000015612 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000015612
Nameccr2
Descriptionchemokine (C-C motif) receptor 2 [Source:Xenbase;Acc:XB-GENE-6460521]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)20 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.26e4
  • 1.26e4
32.45
  • 32.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
31.22
  • 31.22
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.48e4
  • 1.48e4
20.16
  • 20.16
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.58e4
  • 1.58e4
14.81
  • 14.81
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression

Orthology information comes from OMA : ENSXETG00000015612.

Cross-references

EnsemblENSXETG00000015612 (ccr2)
XenbaseXB-GENE-6460521 (ccr2)
EMBLAAMC01022698
Uniprot/SPTREMBLF6XN13, F6XN13_XENTR

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