X. tropicalis Gene: hdgfrp3 - ENSXETG00000016086 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000016086
Namehdgfrp3
Descriptionhepatoma-derived growth factor, related protein 3 [Source:Xenbase;Acc:XB-GENE-947032]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)loc100125195
Orthologs(s)14 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
382
  • 382
97.95
  • 97.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.10e3
  • 2.10e3
88.68
  • 88.68
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
2.14e3
  • 2.14e3
88.48
  • 88.48
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • UBERON:00072334 cell stage
  • UBERON:0000106zygote stage
3.24e3
  • 3.24e3
  • 3.68e3
  • 3.70e3
  • 3.84e3
  • 4.09e3
  • 4.87e3
  • 5.10e3
  • 5.37e3
  • 5.53e3
  • 5.54e3
  • 5.63e3
  • 5.66e3
  • 5.77e3
  • 5.84e3
  • 6.17e3
  • 6.21e3
  • 6.53e3
  • 6.54e3
  • 6.72e3
  • 6.76e3
  • 7.06e3
  • 7.15e3
  • 7.23e3
  • 7.41e3
  • 7.52e3
  • 7.77e3
  • 7.96e3
  • 8.29e3
  • 8.82e3
  • 9.23e3
  • 9.94e3
  • 1.12e4
  • 1.42e4
  • 1.43e4
  • 1.46e4
82.58
  • 82.58
  • 80.19
  • 80.08
  • 79.34
  • 78.00
  • 73.79
  • 72.54
  • 71.11
  • 70.28
  • 70.19
  • 69.72
  • 69.57
  • 68.95
  • 68.58
  • 66.79
  • 66.58
  • 64.88
  • 64.84
  • 63.83
  • 63.66
  • 62.05
  • 61.54
  • 61.11
  • 60.14
  • 59.56
  • 58.18
  • 57.20
  • 55.42
  • 52.54
  • 50.36
  • 46.55
  • 39.85
  • 23.38
  • 22.89
  • 21.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
4.34e3
  • 4.34e3
76.67
  • 76.67
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
5.58e3
  • 5.58e3
  • 9.20e3
  • 1.07e4
69.99
  • 69.99
  • 50.49
  • 42.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
5.89e3
  • 5.89e3
68.30
  • 68.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
7.37e3
  • 7.37e3
60.36
  • 60.36
AEIR
  • AEIR
UBERON:0001017central nervous system
  • XAO:1000091climax stage (Xenopus)
8.15e3
  • 8.15e3
56.14
  • 56.14
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
35.72
  • 35.72
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.37e4
  • 1.37e4
26.03
  • 26.03
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

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