X. tropicalis Gene: slc4a10 - ENSXETG00000016198 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000016198
Nameslc4a10
Descriptionsolute carrier family 4, sodium bicarbonate transporter, member 10 [Source:Xenbase;Acc:XB-GENE-1011116]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)27 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
3.97e3
  • 3.97e3
78.65
  • 78.65
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
4.53e3
  • 4.53e3
75.64
  • 75.64
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
8.98e3
  • 8.98e3
  • 9.55e3
  • 1.04e4
  • 1.05e4
  • 1.08e4
  • 1.17e4
  • 1.21e4
  • 1.27e4
  • 1.30e4
  • 1.36e4
  • 1.37e4
  • 1.38e4
  • 1.38e4
  • 1.40e4
  • 1.47e4
  • 1.52e4
  • 1.54e4
  • 1.59e4
  • 1.60e4
51.69
  • 51.69
  • 48.64
  • 43.90
  • 43.68
  • 41.99
  • 37.02
  • 34.69
  • 31.85
  • 30.30
  • 26.78
  • 26.56
  • 25.84
  • 25.57
  • 24.57
  • 20.66
  • 18.12
  • 17.09
  • 14.59
  • 14.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
1.40e4
  • 1.40e4
24.89
  • 24.89
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
23.19
  • 23.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria26 species27 genesCompare expression

Orthology information comes from OMA : ENSXETG00000016198.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Bilateria5 genesCompare expression

Paralogy information comes from OMA : ENSXETG00000016198.

Cross-references

EnsemblENSXETG00000016198 (slc4a10)
XenbaseXB-GENE-1011116 (slc4a10)
EMBLAAMC01021051, AAMC01021052, AAMC01021053, AAMC01021054
Uniprot/SPTREMBLF6ZT13, F6ZT13_XENTR

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