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X. tropicalis Gene: myh4 - ENSXETG00000016248 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000016248
Namemyh4
Descriptionmyosin, heavy chain 4, skeletal muscle [Source:Xenbase;Acc:XB-GENE-989283]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)myh2, myh4gn
Orthologs(s)72 orthologs
Paralog(s)14 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
72.0
  • 72.0
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0002101limb
  • XAO:1000079metamorphosing tadpole stage (Xenopus)
1.01e3
  • 1.01e3
94.59
  • 94.59
AEIR
  • AEIR
UBERON:0001474bone element
  • UBERON:0000113post-juvenile adult stage
1.47e3
  • 1.47e3
92.09
  • 92.09
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • XAO:1000074NF stage 62 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000080late tailbud stage (Xenopus)
8.32e3
  • 8.32e3
  • 9.16e3
  • 9.36e3
55.23
  • 55.23
  • 50.70
  • 49.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003101male organism
  • UBERON:0000113post-juvenile adult stage
8.96e3
  • 8.96e3
51.79
  • 51.79
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.81e3
  • 9.81e3
47.22
  • 47.22
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
43.07
  • 43.07
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.22e4
  • 1.22e4
34.16
  • 34.16
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000109gastrula stage
1.26e4
  • 1.26e4
  • 1.32e4
32.02
  • 32.02
  • 29.21
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.27e4
  • 1.27e4
31.88
  • 31.88
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • UBERON:00072322 cell stage
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • UBERON:00072334 cell stage
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000106zygote stage
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
1.30e4
  • 1.30e4
  • 1.32e4
  • 1.35e4
  • 1.35e4
  • 1.36e4
  • 1.38e4
  • 1.41e4
  • 1.41e4
  • 1.44e4
  • 1.49e4
  • 1.53e4
  • 1.54e4
  • 1.55e4
  • 1.55e4
  • 1.56e4
  • 1.57e4
  • 1.58e4
  • 1.58e4
30.26
  • 30.26
  • 29.11
  • 27.47
  • 27.14
  • 26.94
  • 26.01
  • 24.23
  • 23.90
  • 22.78
  • 19.71
  • 17.87
  • 17.30
  • 16.65
  • 16.50
  • 16.26
  • 15.31
  • 14.96
  • 14.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
26.37
  • 26.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
22.92
  • 22.92
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda18 species54 genesCompare expression
Euteleostomi19 species62 genesCompare expression
Bilateria25 species72 genesCompare expression

Orthology information comes from OMA : ENSXETG00000016248.

Paralogs (same species)

Cross-references

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