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X. tropicalis Gene: eomes - ENSXETG00000019924 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000019924
Nameeomes
Descriptioneomesodermin [Source:Xenbase;Acc:XB-GENE-479769]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)tbr2, xeomes
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
1.07e3
  • 1.07e3
  • 2.83e3
  • 8.40e3
94.25
  • 94.25
  • 84.81
  • 54.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • UBERON:00072368 cell stage
  • UBERON:00072334 cell stage
2.42e3
  • 2.42e3
  • 3.35e3
  • 4.30e3
  • 5.66e3
  • 6.75e3
  • 7.72e3
  • 8.48e3
  • 8.96e3
  • 9.16e3
  • 9.27e3
  • 9.57e3
  • 9.98e3
  • 1.01e4
  • 1.01e4
  • 1.02e4
  • 1.02e4
  • 1.04e4
  • 1.04e4
  • 1.04e4
  • 1.06e4
  • 1.07e4
  • 1.07e4
  • 1.11e4
  • 1.14e4
  • 1.18e4
  • 1.23e4
  • 1.27e4
  • 1.28e4
  • 1.29e4
  • 1.33e4
  • 1.33e4
  • 1.34e4
  • 1.36e4
  • 1.39e4
  • 1.40e4
  • 1.48e4
86.97
  • 86.97
  • 81.96
  • 76.88
  • 69.55
  • 63.71
  • 58.48
  • 54.38
  • 51.82
  • 50.70
  • 50.12
  • 48.51
  • 46.33
  • 45.76
  • 45.73
  • 45.19
  • 45.04
  • 44.20
  • 44.09
  • 43.96
  • 43.20
  • 42.25
  • 42.21
  • 40.29
  • 38.82
  • 36.30
  • 33.91
  • 31.88
  • 31.03
  • 30.72
  • 28.64
  • 28.47
  • 27.77
  • 26.90
  • 25.05
  • 24.88
  • 20.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
3.10e3
  • 3.10e3
  • 3.10e3
  • 9.29e3
  • 9.29e3
  • 9.30e3
83.34
  • 83.34
  • 83.34
  • 50.00
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
4.65e3
  • 4.65e3
  • 9.29e3
  • 9.29e3
75.00
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
5.74e3
  • 5.74e3
  • 9.83e3
69.14
  • 69.14
  • 47.10
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • XAO:1000044NF stage 28 (Xenopus)
7.44e3
  • 7.44e3
  • 9.30e3
59.98
  • 59.98
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000926mesoderm
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
9.29e3
  • 9.29e3
  • 9.29e3
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • XAO:1000052NF stage 40 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002346neurectoderm
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
9.29e3
  • 9.29e3
  • 9.29e3
  • 9.29e3
  • 9.29e3
50.00
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003062primitive knot
  • XAO:1000022NF stage 12 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003075neural plate
  • XAO:1000037NF stage 21 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003112olfactory region
  • XAO:1000052NF stage 40 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005093embryonic cement gland
  • XAO:1000052NF stage 40 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
XAO:0000049cement gland primordium (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • XAO:1000052NF stage 40 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • XAO:1000026NF stage 16 (Xenopus)
9.29e3
  • 9.29e3
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001017central nervous system
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
9.29e3
  • 9.29e3
  • 9.29e3
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
29.77
  • 29.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.52e4
  • 1.52e4
18.37
  • 18.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: Xenbase
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: Xenbase
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSXETG00000019924.

Cross-references

EnsemblENSXETG00000019924 (eomes)
XenbaseXB-GENE-479769 (eomes)
EMBLAAMC01012196
Uniprot/SPTREMBLF6XFB1, F6XFB1_XENTR

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