We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

X. tropicalis Gene: cdh11 - ENSXETG00000020467 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000020467
Namecdh11
Descriptioncadherin 11, type 2, OB-cadherin (osteoblast) [Source:Xenbase;Acc:XB-GENE-483599]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)20 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
2.25e3
  • 2.25e3
  • 2.27e3
  • 2.32e3
  • 3.07e3
  • 3.35e3
  • 3.38e3
  • 3.45e3
  • 3.47e3
  • 3.51e3
  • 3.60e3
  • 3.97e3
  • 4.94e3
  • 4.95e3
  • 5.12e3
  • 5.42e3
  • 5.74e3
  • 5.80e3
  • 5.88e3
  • 5.97e3
  • 6.15e3
  • 6.18e3
  • 6.21e3
  • 6.37e3
  • 6.47e3
  • 6.53e3
  • 6.57e3
  • 6.62e3
  • 6.95e3
  • 7.14e3
  • 7.26e3
  • 7.73e3
  • 1.14e4
87.91
  • 87.91
  • 87.81
  • 87.52
  • 83.49
  • 81.98
  • 81.81
  • 81.47
  • 81.33
  • 81.13
  • 80.62
  • 78.66
  • 73.40
  • 73.35
  • 72.46
  • 70.84
  • 69.12
  • 68.78
  • 68.35
  • 67.91
  • 66.93
  • 66.76
  • 66.62
  • 65.72
  • 65.20
  • 64.87
  • 64.65
  • 64.39
  • 62.60
  • 61.60
  • 60.96
  • 58.41
  • 38.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
4.72e3
  • 4.72e3
74.60
  • 74.60
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
6.80e3
  • 6.80e3
63.42
  • 63.42
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.87e3
  • 6.87e3
63.05
  • 63.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
7.94e3
  • 7.94e3
  • 9.60e3
  • 1.27e4
57.29
  • 57.29
  • 48.36
  • 31.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
43.82
  • 43.82
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.09e4
  • 1.09e4
41.34
  • 41.34
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
36.07
  • 36.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
30.90
  • 30.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda17 species19 genesCompare expression
Euteleostomi18 species20 genesCompare expression

Orthology information comes from OMA : ENSXETG00000020467.

Paralogs (same species)

Cross-references

Do not show this banner again