X. tropicalis Gene: hdac8 - ENSXETG00000020527 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000020527
Namehdac8
Descriptionhistone deacetylase 8 [Source:Xenbase;Acc:XB-GENE-5863426]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)hd8

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000109gastrula stage
2.39e3
  • 2.39e3
  • 3.21e3
  • 4.25e3
87.05468
  • 87.05468
  • 82.60531
  • 76.97786
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • UBERON:00072322 cell stage
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • UBERON:0000109gastrula stage
2.71e3
  • 2.71e3
  • 2.81e3
  • 2.85e3
  • 2.85e3
  • 3.21e3
  • 3.23e3
  • 3.33e3
  • 3.59e3
  • 4.23e3
  • 4.56e3
  • 4.93e3
  • 5.22e3
  • 9.24e3
85.34380
  • 85.34380
  • 84.81862
  • 84.60206
  • 84.57499
  • 82.64754
  • 82.52301
  • 81.98774
  • 80.58606
  • 77.12918
  • 75.30931
  • 73.31581
  • 71.76534
  • 49.97022
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
3.63e3
  • 3.63e3
  • 4.56e3
80.35734
  • 80.35734
  • 75.30525
AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
4.29e3
  • 4.29e3
76.78132
  • 76.78132
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
5.73e3
  • 5.73e3
68.96787
  • 68.96787
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.30e3
  • 6.30e3
65.88136
  • 65.88136
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
6.55e3
  • 6.55e3
64.53692
  • 64.53692
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
6.81e3
  • 6.81e3
63.13596
  • 63.13596
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
6.86e3
  • 6.86e3
62.88249
  • 62.88249
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
6.89e3
  • 6.89e3
62.70783
  • 62.70783
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000109gastrula stage
  • UBERON:0000110neurula stage
  • UBERON:0000068embryo stage
  • UBERON:0000106zygote stage
  • XAO:1000007tailbud stage (Xenopus)
  • XAO:1000080late tailbud stage (Xenopus)
  • UBERON:0000104life cycle
  • XAO:1000041NF stage 25 (Xenopus)
8.28e3
  • 8.28e3
  • 8.70e3
  • 8.90e3
  • 8.91e3
  • 9.14e3
  • 9.24e3
  • 9.25e3
  • 9.26e3
55.14949
  • 55.14949
  • 52.90839
  • 51.79767
  • 51.74553
  • 50.52014
  • 49.98625
  • 49.91608
  • 49.84570
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
8.29e3
  • 8.29e3
55.12723
  • 55.12723
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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