X. tropicalis Gene: - ENSXETG00000022571 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000022571
Name-
Description-
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
42.87
  • 42.87
AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.10e4
  • 1.10e4
40.97
  • 40.97
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
1.14e4
  • 1.14e4
  • 1.72e4
38.67
  • 38.67
  • 7.41
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
1.33e4
  • 1.33e4
  • 1.71e4
  • 1.74e4
  • 1.75e4
28.33
  • 28.33
  • 8.26
  • 6.34
  • 5.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.33e4
  • 1.33e4
28.32
  • 28.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Xenopus2 genesCompare expression

Paralogy information comes from OMA : ENSXETG00000022571.

Cross-references

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