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X. tropicalis Gene: - ENSXETG00000022663 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000022663
Name-
Description-
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)23 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
7.35e3
  • 7.35e3
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.04e4
  • 1.04e4
43.85
  • 43.85
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
39.57
  • 39.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
37.49
  • 37.49
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • UBERON:00072322 cell stage
  • UBERON:00072368 cell stage
  • UBERON:0000106zygote stage
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
1.19e4
  • 1.19e4
  • 1.22e4
  • 1.27e4
  • 1.29e4
  • 1.31e4
  • 1.45e4
  • 1.49e4
  • 1.51e4
  • 1.62e4
  • 1.67e4
  • 1.71e4
35.87
  • 35.87
  • 34.47
  • 31.47
  • 30.85
  • 29.73
  • 21.78
  • 19.83
  • 18.54
  • 12.63
  • 10.00
  • 8.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
35.81
  • 35.81
AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.21e4
  • 1.21e4
34.89
  • 34.89
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.41e4
  • 1.41e4
24.23
  • 24.23
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.57e4
  • 1.57e4
15.55
  • 15.55
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
1.61e4
  • 1.61e4
13.27
  • 13.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSXETG00000022663.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria2 genesCompare expression

Paralogy information comes from OMA : ENSXETG00000022663.

Cross-references

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