X. tropicalis Gene: hbe1 - ENSXETG00000024627 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000024627
Namehbe1
Descriptionhemoglobin, epsilon 1 [Source:Xenbase;Acc:XB-GENE-5722135]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)hbb2, hbe

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
80.0
  • 80.0
  • 144
  • 683
  • 783
  • 1.11e4
  • 1.17e4
  • 1.29e4
99.57246
  • 99.57246
  • 99.22377
  • 96.30753
  • 95.76611
  • 39.94996
  • 36.68652
  • 30.08703
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
6.19e3
  • 6.19e3
  • 1.35e4
66.49718
  • 66.49718
  • 26.93942
AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.43e4
  • 1.43e4
22.32891
  • 22.32891
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
20.97574
  • 20.97574
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.54e4
  • 1.54e4
16.70726
  • 16.70726
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.59e4
  • 1.59e4
13.91701
  • 13.91701
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLAAMC01112235
EnsemblENSXETG00000024627 (hbe1)
Uniprot/SPTREMBLF6RIQ8, F6RIQ8_XENTR
XenbaseXB-GENE-5722135 (hbe1)

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