X. tropicalis Gene: hbg1 - ENSXETG00000025667 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000025667
Namehbg1
Descriptionhemoglobin, gamma A [Source:Xenbase;Acc:XB-GENE-5912896]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)beta-globin, hbb1, hbga, hbgr, hsggl1, q5i0s7

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
57.7
  • 57.7
99.69311
  • 99.69311
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
147
  • 147
99.21171
  • 99.21171
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
182
  • 182
99.02003
  • 99.02003
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
185
  • 185
99.00423
  • 99.00423
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
93.25531
  • 93.25531
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.73e3
  • 4.73e3
74.40296
  • 74.40296
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.09e3
  • 5.09e3
72.45355
  • 72.45355
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
7.79e3
  • 7.79e3
  • 1.10e4
  • 1.18e4
  • 1.31e4
  • 1.38e4
  • 1.41e4
  • 1.41e4
  • 1.56e4
57.82891
  • 57.82891
  • 40.50352
  • 36.35652
  • 29.22519
  • 25.45468
  • 23.83265
  • 23.52503
  • 15.44488
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
9.00e3
  • 9.00e3
  • 1.59e4
51.26151
  • 51.26151
  • 13.70574
AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
9.08e3
  • 9.08e3
50.86795
  • 50.86795
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.41e4
  • 1.41e4
23.59691
  • 23.59691
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC088022, M32457
EnsemblENSXETG00000025667 (hbg1)
Uniprot/SWISSPROTHBB1_XENTR, P07429
XenbaseXB-GENE-5912896 (hbg1)

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