X. tropicalis Gene: b3gnt5 - ENSXETG00000025974 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000025974
Nameb3gnt5
DescriptionUDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Source:Xenbase;Acc:XB-GENE-955708]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)b3gn-t5, beta3gn-t5, bgnt-5, q07g20

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
996
  • 996
94.61213
  • 94.61213
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
1.65e3
  • 1.65e3
91.06659
  • 91.06659
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • UBERON:00072334 cell stage
  • XAO:1000026NF stage 16 (Xenopus)
  • UBERON:00072368 cell stage
  • UBERON:00072322 cell stage
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • UBERON:0000106zygote stage
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
2.25e3
  • 2.25e3
  • 3.74e3
  • 3.82e3
  • 3.87e3
  • 3.88e3
  • 4.03e3
  • 5.73e3
  • 7.66e3
  • 8.06e3
  • 9.24e3
  • 1.05e4
  • 1.10e4
  • 1.18e4
87.81137
  • 87.81137
  • 79.76178
  • 79.31240
  • 79.04710
  • 79.00920
  • 78.17001
  • 68.97672
  • 58.51934
  • 56.37923
  • 49.96481
  • 43.40092
  • 40.27786
  • 36.27638
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
4.15e3
  • 4.15e3
  • 5.20e3
77.53054
  • 77.53054
  • 71.82999
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
4.74e3
  • 4.74e3
74.35655
  • 74.35655
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
5.92e3
  • 5.92e3
67.97000
  • 67.97000
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • UBERON:0000109gastrula stage
  • XAO:1000020NF stage 10 (Xenopus)
6.26e3
  • 6.26e3
  • 9.80e3
  • 9.93e3
66.13427
  • 66.13427
  • 46.96275
  • 46.26221
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • XAO:1000041NF stage 25 (Xenopus)
  • UBERON:0000109gastrula stage
  • XAO:1000080late tailbud stage (Xenopus)
  • UBERON:0000110neurula stage
  • XAO:1000007tailbud stage (Xenopus)
6.87e3
  • 6.87e3
  • 8.44e3
  • 9.11e3
  • 9.16e3
  • 9.17e3
  • 9.21e3
  • 9.27e3
62.80509
  • 62.80509
  • 54.33492
  • 50.69589
  • 50.42783
  • 50.34613
  • 50.16486
  • 49.81321
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
7.50e3
  • 7.50e3
59.40386
  • 59.40386
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
8.56e3
  • 8.56e3
53.66817
  • 53.66817
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000113post-juvenile adult stage
9.09e3
  • 9.09e3
50.76833
  • 50.76833
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
9.49e3
  • 9.49e3
48.63182
  • 48.63182
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.19e4
  • 1.19e4
35.37520
  • 35.37520
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC063912, BC080164, CR848570
EnsemblENSXETG00000025974 (b3gnt5)
Uniprot/SWISSPROTB3GN5_XENTR, Q6P3P5
XenbaseXB-GENE-955708 (b3gnt5)

Do not show this banner again