We are happy to announce that we have released the new Bgee 15 version as a beta test. Please check it out at https://bgee.org/bgee15_0.

X. tropicalis Gene: XB-GENE-5856185 - ENSXETG00000027271 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000027271
NameXB-GENE-5856185
Descriptionhypothetical LOC496737 [Source:Xenbase;Acc:XB-GENE-5856185]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)44 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
782
  • 782
95.80
  • 95.80
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.71e3
  • 1.71e3
90.79
  • 90.79
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000046NF stage 31 (Xenopus)
  • XAO:1000040NF stage 24 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000039NF stage 23 (Xenopus)
  • XAO:1000038NF stage 22 (Xenopus)
  • XAO:1000041NF stage 25 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000036NF stage 20 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • UBERON:00072368 cell stage
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • UBERON:0000106zygote stage
  • XAO:1000052NF stage 40 (Xenopus)
  • UBERON:00072334 cell stage
6.27e3
  • 6.27e3
  • 6.83e3
  • 7.36e3
  • 7.57e3
  • 7.58e3
  • 7.65e3
  • 7.70e3
  • 7.96e3
  • 8.06e3
  • 8.16e3
  • 8.99e3
  • 9.46e3
  • 1.02e4
  • 1.07e4
  • 1.09e4
  • 1.11e4
  • 1.15e4
  • 1.20e4
  • 1.21e4
  • 1.21e4
  • 1.26e4
  • 1.27e4
  • 1.28e4
  • 1.30e4
  • 1.30e4
  • 1.31e4
  • 1.31e4
  • 1.33e4
  • 1.33e4
  • 1.34e4
  • 1.39e4
  • 1.39e4
  • 1.40e4
  • 1.41e4
  • 1.42e4
  • 1.45e4
  • 1.52e4
  • 1.53e4
66.27
  • 66.27
  • 63.26
  • 60.39
  • 59.26
  • 59.24
  • 58.83
  • 58.60
  • 57.18
  • 56.63
  • 56.12
  • 51.64
  • 49.14
  • 45.31
  • 42.32
  • 41.55
  • 40.08
  • 38.30
  • 35.20
  • 34.95
  • 34.94
  • 32.40
  • 31.53
  • 31.37
  • 30.24
  • 29.97
  • 29.71
  • 29.50
  • 28.59
  • 28.46
  • 27.74
  • 25.32
  • 25.14
  • 24.81
  • 24.27
  • 23.49
  • 22.16
  • 18.34
  • 17.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
6.64e3
  • 6.64e3
64.27
  • 64.27
AEIR
  • AEIR
UBERON:0003101male organism
  • UBERON:0000113post-juvenile adult stage
8.62e3
  • 8.62e3
53.64
  • 53.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000113post-juvenile adult stage
8.95e3
  • 8.95e3
51.83
  • 51.83
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • XAO:1000041NF stage 25 (Xenopus)
  • UBERON:0000109gastrula stage
  • XAO:1000007tailbud stage (Xenopus)
  • UBERON:0000110neurula stage
9.16e3
  • 9.16e3
  • 9.27e3
  • 9.33e3
  • 9.35e3
50.70
  • 50.70
  • 50.14
  • 49.81
  • 49.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
38.88
  • 38.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.14e4
  • 1.14e4
38.52
  • 38.52
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.15e4
  • 1.15e4
37.87
  • 37.87
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
25.75
  • 25.75
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
1.40e4
  • 1.40e4
24.78
  • 24.78
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.63e4
  • 1.63e4
12.41
  • 12.41
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda17 species43 genesCompare expression
Euteleostomi18 species44 genesCompare expression

Orthology information comes from OMA : ENSXETG00000027271.

Paralogs (same species)

Cross-references

EnsemblENSXETG00000027271 (XB-GENE-5856185)
XenbaseXB-GENE-5856185
EMBLAAMC01138209, AAMC01138210
Uniprot/SPTREMBLF6Y925, F6Y925_XENTR

Do not show this banner again