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X. tropicalis Gene: XB-GENE-5806705 - ENSXETG00000027564 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000027564
NameXB-GENE-5806705
DescriptionCyp2f2 protein [Source:Xenbase;Acc:XB-GENE-5806705]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)cyp2f2
Orthologs(s)53 orthologs
Paralog(s)75 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
329
  • 329
98.24
  • 98.24
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.42e3
  • 1.42e3
92.38
  • 92.38
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • XAO:1000080late tailbud stage (Xenopus)
9.36e3
  • 9.36e3
49.63
  • 49.63
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.39e4
  • 1.39e4
25.18
  • 25.18
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.46e4
  • 1.46e4
21.26
  • 21.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda16 species53 genesCompare expression

Orthology information comes from OMA : ENSXETG00000027564.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Tetrapoda9 genesCompare expression
Opisthokonta75 genesCompare expression

Paralogy information comes from OMA : ENSXETG00000027564.

Cross-references

EnsemblENSXETG00000027564 (XB-GENE-5806705)
XenbaseXB-GENE-5806705
EMBLAAMC01092233, BC076922
Uniprot/SPTREMBLQ6DF21, Q6DF21_XENTR

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