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X. tropicalis Gene: fbxo47 - ENSXETG00000027829 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000027829
Namefbxo47
DescriptionF-box protein 47 [Source:Xenbase;Acc:XB-GENE-5764934]
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.76e3
  • 2.76e3
85.14
  • 85.14
AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
7.84e3
  • 7.84e3
57.80
  • 57.80
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:00072368 cell stage
  • UBERON:00072334 cell stage
  • XAO:1000030NF stage 10.25 (Xenopus)
  • UBERON:00072322 cell stage
  • UBERON:0000106zygote stage
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000015NF stage 5 (16-cell) (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000043NF stage 27 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
7.93e3
  • 7.93e3
  • 8.03e3
  • 8.03e3
  • 8.09e3
  • 8.11e3
  • 8.48e3
  • 8.64e3
  • 8.67e3
  • 8.85e3
  • 8.94e3
  • 8.96e3
  • 9.79e3
  • 9.84e3
  • 1.03e4
  • 1.17e4
  • 1.23e4
  • 1.30e4
  • 1.38e4
  • 1.39e4
  • 1.43e4
  • 1.49e4
  • 1.51e4
  • 1.53e4
  • 1.56e4
  • 1.57e4
  • 1.57e4
57.36
  • 57.36
  • 56.79
  • 56.78
  • 56.50
  • 56.37
  • 54.36
  • 53.51
  • 53.35
  • 52.39
  • 51.93
  • 51.81
  • 47.31
  • 47.08
  • 44.51
  • 36.82
  • 34.08
  • 30.03
  • 25.85
  • 25.46
  • 23.28
  • 19.84
  • 18.77
  • 17.46
  • 16.04
  • 15.80
  • 15.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000018NF stage 8 (Xenopus)
8.38e3
  • 8.38e3
  • 8.70e3
54.90
  • 54.90
  • 53.18
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000109gastrula stage
9.00e3
  • 9.00e3
  • 9.59e3
  • 1.48e4
51.56
  • 51.56
  • 48.41
  • 20.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
9.97e3
  • 9.97e3
46.37
  • 46.37
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000113post-juvenile adult stage
1.24e4
  • 1.24e4
33.26
  • 33.26
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
1.53e4
  • 1.53e4
17.59
  • 17.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSXETG00000027829 (fbxo47)
XenbaseXB-GENE-5764934 (fbxo47)
EMBLAAMC01109012
Uniprot/SPTREMBLF6X1T6, F6X1T6_XENTR

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