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X. tropicalis Gene: - ENSXETG00000027921 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000027921
Name-
Description-
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)1 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000045NF stage 29 and 30 (Xenopus)
  • XAO:1000042NF stage 26 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000044NF stage 28 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
1.40e4
  • 1.40e4
  • 1.42e4
  • 1.51e4
  • 1.54e4
  • 1.54e4
  • 1.56e4
  • 1.56e4
  • 1.57e4
  • 1.69e4
  • 1.71e4
  • 1.74e4
24.47
  • 24.47
  • 23.40
  • 18.94
  • 17.26
  • 16.95
  • 16.24
  • 15.90
  • 15.37
  • 9.06
  • 7.77
  • 6.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.55e4
  • 1.55e4
16.66
  • 16.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
1.67e4
  • 1.67e4
10.12
  • 10.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria1 species1 geneCompare expression

Orthology information comes from OMA : ENSXETG00000027921.

Paralogs (same species)

Cross-references

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