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X. tropicalis Gene: - ENSXETG00000031116 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000031116
Name-
Description-
OrganismXenopus tropicalis (western clawed frog)
Orthologs(s)3 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.16e4
  • 1.16e4
37.73
  • 37.73
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
1.38e4
  • 1.38e4
25.63
  • 25.63
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000029NF stage 6.5 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • UBERON:0000106zygote stage
1.38e4
  • 1.38e4
  • 1.50e4
  • 1.51e4
  • 1.53e4
  • 1.54e4
  • 1.55e4
  • 1.56e4
  • 1.58e4
  • 1.58e4
  • 1.59e4
25.51
  • 25.51
  • 19.56
  • 18.66
  • 17.66
  • 17.17
  • 16.66
  • 16.01
  • 15.10
  • 15.05
  • 14.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000113post-juvenile adult stage
1.44e4
  • 1.44e4
22.66
  • 22.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • XAO:1000020NF stage 10 (Xenopus)
  • UBERON:0000109gastrula stage
1.46e4
  • 1.46e4
  • 1.69e4
21.29
  • 21.29
  • 9.04
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
20.70
  • 20.70
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
1.50e4
  • 1.50e4
19.44
  • 19.44
AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000019NF stage 9 (Xenopus)
1.55e4
  • 1.55e4
16.65
  • 16.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Paralogy information comes from OMA : ENSXETG00000031116.

Cross-references

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