X. tropicalis Gene: SNTG2 - ENSXETG00000033911 - Xenopus tropicalis (western clawed frog)

General information

Ensembl IDENSXETG00000033911
NameSNTG2
Descriptionsyntrophin, gamma 2 [Source:HGNC Symbol;Acc:HGNC:13741]
OrganismXenopus tropicalis (western clawed frog)
Synonym(s)g2syn, syn5
Orthologs(s)22 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
9.48e3
  • 9.48e3
49.00
  • 49.00
AEIR
  • AEIR
CL:0000025egg cell
  • UBERON:0000113post-juvenile adult stage
1.17e4
  • 1.17e4
36.90
  • 36.90
AEIR
  • AEIR
UBERON:0000922embryo
  • XAO:1000017NF stage 7 (Xenopus)
  • XAO:1000029NF stage 6.5 (Xenopus)
  • UBERON:0000106zygote stage
  • UBERON:00072322 cell stage
  • XAO:1000016NF stage 6 (32-cell) (Xenopus)
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000033NF stage 12.5 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
  • XAO:1000020NF stage 10 (Xenopus)
  • XAO:1000030NF stage 10.25 (Xenopus)
  • XAO:1000051NF stage 39 (Xenopus)
  • XAO:1000023NF stage 13 (Xenopus)
  • XAO:1000024NF stage 14 (Xenopus)
  • XAO:1000031NF stage 10.5 (Xenopus)
  • XAO:1000032NF stage 11.5 (Xenopus)
  • XAO:1000050NF stage 37 and 38 (Xenopus)
  • XAO:1000026NF stage 16 (Xenopus)
  • XAO:1000021NF stage 11 (Xenopus)
  • XAO:1000022NF stage 12 (Xenopus)
  • XAO:1000049NF stage 35 and 36 (Xenopus)
  • XAO:1000037NF stage 21 (Xenopus)
  • XAO:1000052NF stage 40 (Xenopus)
  • XAO:1000034NF stage 18 (Xenopus)
  • XAO:1000047NF stage 32 (Xenopus)
  • XAO:1000048NF stage 33 and 34 (Xenopus)
  • XAO:1000025NF stage 15 (Xenopus)
  • XAO:1000027NF stage 17 (Xenopus)
  • XAO:1000035NF stage 19 (Xenopus)
1.19e4
  • 1.19e4
  • 1.20e4
  • 1.20e4
  • 1.26e4
  • 1.31e4
  • 1.31e4
  • 1.38e4
  • 1.39e4
  • 1.48e4
  • 1.48e4
  • 1.50e4
  • 1.54e4
  • 1.57e4
  • 1.57e4
  • 1.57e4
  • 1.57e4
  • 1.57e4
  • 1.58e4
  • 1.58e4
  • 1.58e4
  • 1.59e4
  • 1.60e4
  • 1.62e4
  • 1.63e4
  • 1.63e4
  • 1.64e4
  • 1.65e4
  • 1.66e4
  • 1.68e4
  • 1.72e4
36.06
  • 36.06
  • 35.38
  • 35.19
  • 32.13
  • 29.49
  • 29.41
  • 25.62
  • 25.14
  • 20.23
  • 20.16
  • 19.45
  • 17.27
  • 15.62
  • 15.46
  • 15.44
  • 15.33
  • 15.30
  • 15.18
  • 15.17
  • 15.00
  • 14.30
  • 14.13
  • 13.07
  • 12.54
  • 12.39
  • 11.54
  • 11.26
  • 10.76
  • 9.88
  • 7.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • XAO:1000018NF stage 8 (Xenopus)
  • XAO:1000019NF stage 9 (Xenopus)
1.21e4
  • 1.21e4
  • 1.38e4
34.90
  • 34.90
  • 25.70
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000113post-juvenile adult stage
1.36e4
  • 1.36e4
27.09
  • 27.09
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.54e4
  • 1.54e4
17.13
  • 17.13
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
1.68e4
  • 1.68e4
9.50
  • 9.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Tetrapoda14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSXETG00000033911.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSXETG00000033911.

Cross-references

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